DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoBTB and Rnd2

DIOPT Version :10

Sequence 1:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_001010953.1 Gene:Rnd2 / 303553 RGDID:1306172 Length:228 Species:Rattus norvegicus


Alignment Length:238 Identity:72/238 - (30%)
Similarity:114/238 - (47%) Gaps:35/238 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVPTVWAIDQYRIYKDVLERSWEVVDGVNVSL 79
            |.|:|||...|||.|:...|.:.:.      .::||||:  :.|       ..|:| :|...:.|
  Rat     9 KIVVVGDAECGKTALLQVFAKDAYP------GSYVPTVF--ENY-------TASFE-IDKRRIEL 57

  Fly    80 RLWDTFGD--HDKDRRFAYGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFCPDVPVILVGCKND 142
            .:|||.|.  :|..|..||..||.||:||.|:.|.:|.:....|..|.:.|||:..|:|||||.|
  Rat    58 NMWDTSGSSYYDNVRPLAYPDSDAVLICFDISRPETLDSVLKKWQGETQEFCPNAKVVLVGCKLD 122

  Fly   143 LRYMYRDENYLSYFGEKGTFVRAALKSDL--VMPDEARAVAKELG-VAYYE-TSVFTYFGVNEVF 203
            :|            .:..| :|...|..|  |..::...:||::| |:|.| :|..:...|.:||
  Rat   123 MR------------TDLAT-LRELSKQRLIPVTHEQGTVLAKQVGAVSYVECSSRSSERSVRDVF 174

  Fly   204 ENAIRSALIARRQQRFWMTNLKKVQKPLLQAPFRPPKPPPPEV 246
            ..|..::|.....::...|:.::..:...|.|.||.:....|:
  Rat   175 HVATVASLGRGGHRQLRRTDSRRGLQRSTQLPGRPDRGNEGEI 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 65/200 (33%)
BTB1_POZ_RhoBTB 255..452 CDD:349608
BTB2_POZ_RhoBTB 475..582 CDD:349609
BACK_RHOBTB 593..669 CDD:350574
Rnd2NP_001010953.1 P-loop containing Nucleoside Triphosphate Hydrolases 7..228 CDD:476819 72/238 (30%)
Blue background indicates that the domain is not in the aligned region.

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