DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoBTB and Rhoj

DIOPT Version :10

Sequence 1:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_001008321.1 Gene:Rhoj / 299145 RGDID:1310528 Length:211 Species:Rattus norvegicus


Alignment Length:217 Identity:67/217 - (30%)
Similarity:103/217 - (47%) Gaps:46/217 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LVKCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVPTVWAIDQYRIYKDVLERSWEVVDGVNV 77
            ::|||:|||.|||||.|:.:.|.:      .....:||||:  |.|.:        ...|.|...
  Rat    21 ILKCVVVGDGAVGKTCLLMSYAND------AFPEEYVPTVF--DHYAV--------TVTVGGKQH 69

  Fly    78 SLRLWDTFG--DHDKDRRFAYGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFCPDVPVILVGCK 140
            .|.|:||.|  |:::.|..:|..:||.|:|||:.:|.|..|.:..|.||::...|.||.:|:|.:
  Rat    70 LLGLYDTAGQEDYNQLRPLSYPNTDVFLICFSVVNPASYHNVQEEWVPELKDCMPHVPYVLIGTQ 134

  Fly   141 NDL--------RYMYRDENYLSYFGEKGTFVRAALKSDLVMPDEARAVAKELGV-AYYETSVFTY 196
            .||        |.:|..|..|:|  |.|.                 .:||.:|. .|.|.|..|.
  Rat   135 IDLRDDPKTLARLLYMKEKPLTY--EHGV-----------------KLAKAIGAQCYLECSALTQ 180

  Fly   197 FGVNEVFENAIRSALIARRQQR 218
            .|:..||:.||.:....:::::
  Rat   181 KGLKAVFDEAILTIFHPKKKKK 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 67/207 (32%)
BTB1_POZ_RhoBTB 255..452 CDD:349608
BTB2_POZ_RhoBTB 475..582 CDD:349609
BACK_RHOBTB 593..669 CDD:350574
RhojNP_001008321.1 P-loop containing Nucleoside Triphosphate Hydrolases 22..195 CDD:476819 67/207 (32%)
Blue background indicates that the domain is not in the aligned region.

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