DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoBTB and RND1

DIOPT Version :10

Sequence 1:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_055285.1 Gene:RND1 / 27289 HGNCID:18314 Length:232 Species:Homo sapiens


Alignment Length:245 Identity:76/245 - (31%)
Similarity:105/245 - (42%) Gaps:54/245 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QPHQELVKCVLVGDTAVGKTRL--ICARACNKHVSLSQLLSTHVPTVWAIDQYRIYKDVLERSWE 70
            ||.....|.|||||...|||.:  :.|:.|..        .|:||||     :..|...||    
Human     8 QPVVARCKLVLVGDVQCGKTAMLQVLAKDCYP--------ETYVPTV-----FENYTACLE---- 55

  Fly    71 VVDGVNVSLRLWDTFGD--HDKDRRFAYGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFCPDVP 133
             .:...|.|.||||.|.  :|..|...|..||.|||||.|:.|.::.:....|..||..:||...
Human    56 -TEEQRVELSLWDTSGSPYYDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILDYCPSTR 119

  Fly   134 VILVGCKNDLR--------YMYRDENYLSYFGEKGTFVRAALKSDLVMPDEARAVAKELGV-AYY 189
            |:|:|||.|||        ..::.:..:||  |:|.                 |:||:||. .|.
Human   120 VLLIGCKTDLRTDLSTLMELSHQKQAPISY--EQGC-----------------AIAKQLGAEIYL 165

  Fly   190 ETSVFT-YFGVNEVFENAIRSALIARRQQRF-WMTNLKKVQKPLLQAPFR 237
            |.|.|| ...::.:|..|  |.|...:.... ..:.::.:.|.||..|.|
Human   166 EGSAFTSEKSIHSIFRTA--SMLCLNKPSPLPQKSPVRSLSKRLLHLPSR 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 67/211 (32%)
BTB1_POZ_RhoBTB 255..452 CDD:349608
BTB2_POZ_RhoBTB 475..582 CDD:349609
BACK_RHOBTB 593..669 CDD:350574
RND1NP_055285.1 Rnd1_Rho6 1..232 CDD:206737 76/245 (31%)
Effector region. /evidence=ECO:0000255 42..50 4/12 (33%)
Blue background indicates that the domain is not in the aligned region.

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