DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoBTB and Rac1

DIOPT Version :10

Sequence 1:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_001334459.1 Gene:Rac1 / 19353 MGIID:97845 Length:211 Species:Mus musculus


Alignment Length:236 Identity:83/236 - (35%)
Similarity:117/236 - (49%) Gaps:59/236 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ELVKCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVPTVWAIDQYRIYKDVLERSWEVVDGVN 76
            :.:|||:|||.|||||.|:.:...|      .....::|||:  |.|.  .:|:      |||..
Mouse     2 QAIKCVVVGDGAVGKTCLLISYTTN------AFPGEYIPTVF--DNYS--ANVM------VDGKP 50

  Fly    77 VSLRLWDTFGDHDKDR-----------------RFAYGR----SDVVLLCFSIASPISLRNCKMM 120
            |:|.||||.|..|.||                 |.:.|:    :||.|:|||:.||.|..|.:..
Mouse    51 VNLGLWDTAGQEDYDRLRPLSYPQTVGDTCGKDRPSRGKDKPIADVFLICFSLVSPASFENVRAK 115

  Fly   121 WYPEIRRFCPDVPVILVGCKNDLRYMYRDENYLSYFGEKGTFVRAALKSDLVMP---DEARAVAK 182
            ||||:|..||:.|:||||.|.|||            .:|.|..:  ||...:.|   .:..|:||
Mouse   116 WYPEVRHHCPNTPIILVGTKLDLR------------DDKDTIEK--LKEKKLTPITYPQGLAMAK 166

  Fly   183 ELG-VAYYETSVFTYFGVNEVFENAIRSAL----IARRQQR 218
            |:| |.|.|.|..|..|:..||:.|||:.|    :.:|:::
Mouse   167 EIGAVKYLECSALTQRGLKTVFDEAIRAVLCPPPVKKRKRK 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 81/222 (36%)
BTB1_POZ_RhoBTB 255..452 CDD:349608
BTB2_POZ_RhoBTB 475..582 CDD:349609
BACK_RHOBTB 593..669 CDD:350574
Rac1NP_001334459.1 Rac1_like 3..195 CDD:206663 81/221 (37%)
Blue background indicates that the domain is not in the aligned region.

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