DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RhoBTB and LOC1276933

DIOPT Version :10

Sequence 1:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster
Sequence 2:XP_316343.4 Gene:LOC1276933 / 1276933 VectorBaseID:AGAMI1_014642 Length:190 Species:Anopheles gambiae


Alignment Length:199 Identity:58/199 - (29%)
Similarity:93/199 - (46%) Gaps:41/199 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VLVGDTAVGKTRLICARACNKHVSLSQLLST-HVPTVWAIDQYRIYKDVLERSWEVVDGVNVSLR 80
            |:|||.|||||       |..|....:.... :.||::.       |:.:|.   ::||...:::
Mosquito     9 VVVGDGAVGKT-------CLLHAYTDKSFKNFYEPTIYD-------KESIEM---ILDGQKYTIQ 56

  Fly    81 LWDTFG--DHDKDRRFAYGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFCPDVPVILVGCKNDL 143
            |.||.|  ::||.|:..|.|:|..|||:||.:.:|..|....|.|||:. .|.||::|:|.|.|.
Mosquito    57 LHDTAGQEEYDKIRQQFYKRADCFLLCYSIDNRVSFENASTKWIPEIKT-NPPVPIVLLGTKLDN 120

  Fly   144 RYMYRDENYLSYFGEKGTFVRAALKSDLVMPDEARAVAKELGVAYYETSVFTYFGVNEVFENAIR 208
            |   :.:|.....|| |..::.|:.::                ::.|.|...|..|....|..:|
Mosquito   121 R---KGKNNEVSTGE-GDRLKRAINAN----------------SFVECSAKDYRNVELAIEEGVR 165

  Fly   209 SALI 212
            :.|:
Mosquito   166 ACLM 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 57/195 (29%)
BTB1_POZ_RhoBTB 255..452 CDD:349608
BTB2_POZ_RhoBTB 475..582 CDD:349609
BACK_RHOBTB 593..669 CDD:350574
LOC1276933XP_316343.4 Rho 7..166 CDD:206641 56/194 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.