DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoBTB and Rac1

DIOPT Version :10

Sequence 1:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster
Sequence 2:XP_315449.4 Gene:Rac1 / 1276139 VectorBaseID:AGAMI1_000832 Length:192 Species:Anopheles gambiae


Alignment Length:235 Identity:84/235 - (35%)
Similarity:119/235 - (50%) Gaps:52/235 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ELVKCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVPTVWAIDQYRIYKDVLERSWEVVDGVN 76
            :.:|||:|||.|||||.|:.:...|      .....::|||:  |.|.  .:|:      |||..
Mosquito     2 QAIKCVVVGDGAVGKTCLLISYTTN------AFPGEYIPTVF--DNYS--ANVM------VDGKP 50

  Fly    77 VSLRLWDTFG--DHDKDRRFAYGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFCPDVPVILVGC 139
            ::|.||||.|  |:|:.|..:|.::||.|:|||:.:|.|..|.:..||||:|..||::|:||||.
Mosquito    51 INLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPNIPIILVGT 115

  Fly   140 KNDLRYMYRDENYLSYFGEKGTFVRAALKSDLVMPDEARAVAKELG-VAYYETSVFTYFGVNEVF 203
            |.|||   .|:|.:....:|..       |.:..| :..|:|||:| |.|.|.|..|..|:..||
Mosquito   116 KLDLR---DDKNTVDKLRDKKL-------SPITYP-QGLAMAKEIGAVKYLECSALTQKGLKTVF 169

  Fly   204 ENAIRSALIARRQQRFWMTNLKKVQKPLLQAPFRPPKPPP 243
            :.|||:.|                      .|..|||..|
Mosquito   170 DEAIRAVL----------------------CPMIPPKKKP 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 78/200 (39%)
BTB1_POZ_RhoBTB 255..452 CDD:349608
BTB2_POZ_RhoBTB 475..582 CDD:349609
BACK_RHOBTB 593..669 CDD:350574
Rac1XP_315449.4 Rac1_like 3..176 CDD:206663 78/199 (39%)
Blue background indicates that the domain is not in the aligned region.

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