DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoBTB and Rho1

DIOPT Version :10

Sequence 1:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster
Sequence 2:XP_001688510.1 Gene:Rho1 / 1274843 VectorBaseID:AGAMI1_003335 Length:207 Species:Anopheles gambiae


Alignment Length:217 Identity:84/217 - (38%)
Similarity:117/217 - (53%) Gaps:31/217 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 NEQPHQEL-VKCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVPTVWAIDQYRIYKDVLERSW 69
            |.:|...: .|.|:|||.|.|||.|:..      .|..|....:||||     :..|...:|   
Mosquito    12 NSEPMAAIRKKLVIVGDGACGKTCLLIV------FSKDQFPEVYVPTV-----FENYVADIE--- 62

  Fly    70 EVVDGVNVSLRLWDTFG--DHDKDRRFAYGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFCPDV 132
              |||..|.|.||||.|  |:|:.|..:|..:||:|:|||:.||.||.|....|.||::.|||:|
Mosquito    63 --VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNV 125

  Fly   133 PVILVGCKNDLRYMYRDENYLSYFGEKGTFVRAALKSDLVMPDEARAVAKELGV-AYYETSVFTY 196
            |:||||.|.|||   .|.:.:...        |.:|.:.|.|.|.||:|:::.. ||.|.|..:.
Mosquito   126 PIILVGNKKDLR---NDPHTIKEL--------AKMKQEPVKPQEGRAMAEKINAFAYLECSAKSK 179

  Fly   197 FGVNEVFENAIRSALIARRQQR 218
            .||.||||.|.|:||..:::::
Mosquito   180 EGVREVFETATRAALQVKKKKK 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 80/201 (40%)
BTB1_POZ_RhoBTB 255..452 CDD:349608
BTB2_POZ_RhoBTB 475..582 CDD:349609
BACK_RHOBTB 593..669 CDD:350574
Rho1XP_001688510.1 RhoA_like 20..194 CDD:206662 80/200 (40%)
Blue background indicates that the domain is not in the aligned region.

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