DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoBTB and Rnd2

DIOPT Version :10

Sequence 1:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_033838.1 Gene:Rnd2 / 11858 MGIID:1338755 Length:227 Species:Mus musculus


Alignment Length:232 Identity:71/232 - (30%)
Similarity:112/232 - (48%) Gaps:36/232 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVPTVWAIDQYRIYKDVLERSWEVVDGVNVSL 79
            |.|:|||...|||.|:...|.:.:.      .::||||:  :.|       ..|:| :|...:.|
Mouse     9 KIVVVGDAECGKTALLQVFAKDAYP------GSYVPTVF--ENY-------TASFE-IDKRRIEL 57

  Fly    80 RLWDTFGD--HDKDRRFAYGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFCPDVPVILVGCKND 142
            .:|||.|.  :|..|..||..||.||:||.|:.|.:|.:....|..|.:.|||:..|:|||||.|
Mouse    58 NMWDTSGSSYYDNVRPLAYPDSDAVLICFDISRPETLDSVLKKWQGETQEFCPNAKVVLVGCKLD 122

  Fly   143 LRYMYRDENYLSYFGEKGTFVRAALKSDL--VMPDEARAVAKELG-VAYYE-TSVFTYFGVNEVF 203
            :|            .:..| :|...|..|  |..::...:||::| |:|.| :|..:...|.:||
Mouse   123 MR------------TDLAT-LRELSKQRLIPVTHEQGTVLAKQVGAVSYVECSSRSSERSVRDVF 174

  Fly   204 ENAIRSALIARRQQRFWMTNLKKVQKPLLQAPFRPPK 240
            ..|..::| .|..::...|:.::..:...|...||.:
Mouse   175 HVATVASL-GRGHRQLRRTDSRRGLQRSTQLSGRPDR 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 65/200 (33%)
BTB1_POZ_RhoBTB 255..452 CDD:349608
BTB2_POZ_RhoBTB 475..582 CDD:349609
BACK_RHOBTB 593..669 CDD:350574
Rnd2NP_033838.1 Rnd2_Rho7 7..227 CDD:206736 71/232 (31%)
Effector region. /evidence=ECO:0000255 36..44 4/9 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 186..227 4/25 (16%)
Blue background indicates that the domain is not in the aligned region.

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