DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoBTB and Rhob

DIOPT Version :10

Sequence 1:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_031509.1 Gene:Rhob / 11852 MGIID:107949 Length:196 Species:Mus musculus


Alignment Length:215 Identity:85/215 - (39%)
Similarity:111/215 - (51%) Gaps:40/215 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVPTVWAIDQYRIYKDVLERSWEVVDGVNVSL 79
            |.|:|||.|.|||.|:..      .|..:....:||||     :..|...:|     |||..|.|
Mouse     7 KLVVVGDGACGKTCLLIV------FSKDEFPEVYVPTV-----FENYVADIE-----VDGKQVEL 55

  Fly    80 RLWDTFG--DHDKDRRFAYGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFCPDVPVILVGCKND 142
            .||||.|  |:|:.|..:|..:||:|:|||:.||.||.|....|.||::.|||:||:|||..|.|
Mouse    56 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKD 120

  Fly   143 LRYMYRDENYLSYFGEKGTFVR---AALKSDLVMPDEARAVAKEL-GVAYYETSVFTYFGVNEVF 203
            ||   .||:           ||   |.:|.:.|..|:.||:|..: ...|.|.|..|..||.|||
Mouse   121 LR---SDEH-----------VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVF 171

  Fly   204 ENAIRSALIARRQQRFWMTN 223
            |.|.|:||    |:|:...|
Mouse   172 ETATRAAL----QKRYGSQN 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 80/200 (40%)
BTB1_POZ_RhoBTB 255..452 CDD:349608
BTB2_POZ_RhoBTB 475..582 CDD:349609
BACK_RHOBTB 593..669 CDD:350574
RhobNP_031509.1 RhoA_like 5..179 CDD:206662 80/201 (40%)
Effector region. /evidence=ECO:0000255 34..42 4/12 (33%)
Blue background indicates that the domain is not in the aligned region.

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