DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoBTB and rhov

DIOPT Version :9

Sequence 1:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_001122131.1 Gene:rhov / 100038217 XenbaseID:XB-GENE-489435 Length:240 Species:Xenopus tropicalis


Alignment Length:231 Identity:84/231 - (36%)
Similarity:121/231 - (52%) Gaps:34/231 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 NEQPH-QEL-VKCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVPTVWAIDQYRIYKDVLERS 68
            |.:|: ||| :|||||||.|||||.|:.:...|.:.:..|      ||  |:|.:.:  .||   
 Frog    27 NSRPNSQELGIKCVLVGDGAVGKTSLVISYTINGYPTEYQ------PT--ALDTFSV--QVL--- 78

  Fly    69 WEVVDGVNVSLRLWDTFGDHDKD--RRFAYGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFCPD 131
               |||..|.::|.||.|..|.|  |...|..:||.|:|||:.:|.|.:|....|.||||...|.
 Frog    79 ---VDGAPVRIQLCDTAGQEDFDHLRSLCYAETDVFLVCFSVVNPSSFQNVTEKWIPEIRTHSPH 140

  Fly   132 VPVILVGCKNDLRYMYRDENYLSYFGEKGTFVRAALKSDLVMPDEARAVAKEL-GVAYYETSVFT 195
            .|::|||.:.|||   .|.|.|.      ...|:.:|.  |...:|:|||::: ...|.|.|..|
 Frog   141 TPIVLVGTQADLR---DDVNVLI------NLSRSHVKP--VSESQAQAVAQKIRAQTYIECSALT 194

  Fly   196 YFGVNEVFENAIRSAL--IARRQQRFWMTNLKKVQK 229
            ...:.|||:.:|.||:  .||.:::.....:|::.|
 Frog   195 QKNLKEVFDASILSAIKHKARLEKKLTSKGVKRLSK 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 75/201 (37%)
RHO 16..211 CDD:197554 73/197 (37%)
BTB <392..446 CDD:295341
BTB 481..575 CDD:279045
BTB 485..582 CDD:197585
rhovNP_001122131.1 Wrch_1 37..209 CDD:133330 73/198 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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