DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ide and Nrd1

DIOPT Version :9

Sequence 1:NP_524182.3 Gene:Ide / 40248 FlyBaseID:FBgn0001247 Length:990 Species:Drosophila melanogaster
Sequence 2:NP_572757.2 Gene:Nrd1 / 32143 FlyBaseID:FBgn0030344 Length:1147 Species:Drosophila melanogaster


Alignment Length:1111 Identity:286/1111 - (25%)
Similarity:488/1111 - (43%) Gaps:206/1111 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 EKSLQDTRDYRGLQLENGLKVLLISDP------------------------------------NT 56
            :||..|.:.|:.|.|.|||..|::|||                                    :|
  Fly    54 DKSETDKKLYKTLLLGNGLHALIVSDPSPMPHDGFTTSESSSSKSTVSTSSSIISRSESTSSTST 118

  Fly    57 D---------------VSAAALSVQVGHMSDPTNLPGLAHFCEHMLFLGTEKYPHENGYTTYLSQ 106
            |               ::|.||.:..|..::||...|||||.|||:|:|:||||.||.:..::.:
  Fly   119 DSESSEESSSEEGDEKLAACALLIDYGSFAEPTKYQGLAHFLEHMIFMGSEKYPKENIFDAHIKK 183

  Fly   107 SGGSSNAATYPLMTKYHFHVAPDKLDGALDRFAQFFIAPLFTPSATEREINAVNSEHEKNLPSDL 171
            .||.:||.|....|.::|.||...||.:||.|.....|||....|.:||.:||:||.::.|..|.
  Fly   184 CGGFANANTDCEDTLFYFEVAEKHLDSSLDYFTALMKAPLMKQEAMQRERSAVDSEFQQILQDDE 248

  Fly   172 WRIKQVNRHLAKPDHAYSKFGSGNKTTLSEIPKSKNID---VRDELLKFHKQWYSANIMCLAVIG 233
            .|..|:...||.....:..|..||..:|.|     |:|   :...|.:..|:.|.||.|.:.:..
  Fly   249 TRRDQLLASLATKGFPHGTFAWGNMKSLKE-----NVDDAELHKILHEIRKEHYGANRMYVCLQA 308

  Fly   234 KESLDELEGMVLEKFSEIENKNVKVPGWPRHPYAE----ERYGQKVKIVPIKDIRSLTISFTTDD 294
            :..:||||.:|:..||.|.:..||.|......|.:    |.:.|...:.|:::...|.:::...:
  Fly   309 RLPIDELESLVVRHFSGIPHNEVKAPDLSSFNYKDAFKAEFHEQVFFVKPVENETKLELTWVLPN 373

  Fly   295 LTQFYKSGPDNYLTHLIGHEGKGSILSELRRLGWCNDLMAGHQNTQNGF------GFFDIVVDLT 353
            :.|:|:|.||.:|::|:|:||:||:.:.|||..|...|:||..  :|||      ..|:|.:.||
  Fly   374 VRQYYRSKPDQFLSYLLGYEGRGSLCAYLRRRLWALQLIAGID--ENGFDMNSMYSLFNICIYLT 436

  Fly   354 QEGLEHVDDIVKIVFQYLEMLRKEGPKKWIFDECVKLNEMRFRFKEKEQPENLVTHAVSSMQIFP 418
            .||.:::|:::...|.|:::....|..|.:::|..:..|..|||..:....:.|...|.:::.||
  Fly   437 DEGFKNLDEVLAATFAYVKLFANCGSMKDVYEEQQRNEETGFRFHAQRPAFDNVQELVLNLKYFP 501

  Fly   419 LEEVLIAPYLSNEWRPDLIKGLLDELVPSKSRIVIVSQSFEPDC---DLAEPYYKTKYGITRVAK 480
            .:::|....|..|:..:.:|.|:..|...|..:::.|:....|.   |..|.::.|:|....:.:
  Fly   502 PKDILTGKELYYEYNEEHLKELISHLNEMKFNLMVTSRRKYDDISAYDKTEEWFGTEYATIPMPE 566

  Fly   481 DTVQSWENCELNENLKLALPNSFIPTNFDI---SDVPADAPKHPTIILDTPILRVWHKQDNQFNK 542
            ...:.||:......|.|...|.::..:|.:   |....:.|..|.:::.|....:|.:||::|:.
  Fly   567 KWRKLWEDSVPLPELFLPESNKYVTDDFTLHWHSMGRPEVPDSPKLLIKTDTCELWFRQDDKFDL 631

  Fly   543 PKACMTFDMSNPIAYLDPLN---CNLNHMMVMLLKDQLNEYLYDAELASLKLSVMGKSCGIDFTI 604
            |:|.|.|...:|:...:..|   |:|...||   :..:.|.||.|..|.|..|:.....|:...:
  Fly   632 PEAHMAFYFISPMQRQNAKNDAMCSLYEEMV---RFHVCEELYPAISAGLSYSLSTIEKGLLLKV 693

  Fly   605 RGFSDKQVVLLEKLLDHLFDF--SIDEKRFDILKEEYVRSLKNFKAEQPYQHSIYYLALL----- 662
            .|:::|..:::|.:.:.:.:.  ::||......       :||       |...::.||:     
  Fly   694 CGYNEKLHLIVEAIAEGMLNVAETLDENMLSAF-------VKN-------QRKAFFNALIKPKAL 744

  Fly   663 --------LTENAWANMELLDAMELVTYDRVLNFAKEFFQRLHTECFIFGNVTKQQATDIAGRVN 719
                    |....|..:.....:..|..:.:..||.:|.:.|:.:..|.||.|::.|.::   :|
  Fly   745 NRDIRLCVLERIRWLMINKYKCLSSVILEDMREFAHQFPKELYIQSLIQGNYTEESAHNV---MN 806

  Fly   720 TRLEATNASKLPILARQMLKKREYKLLAGDSYLFEKENEFHKSSCAQL-----------YLQCGA 773
            :.|...|..::....| .|:....||..|.|.:          .|..|           :.|.|.
  Fly   807 SLLSRLNCKQIRERGR-FLEDITVKLPVGTSII----------RCHALNVQDTNTVITNFYQIGP 860

  Fly   774 QTDHTNIMVNLVSQVLSEPCYDCLRTKEQLGYIVFSGVRKVNGANGIRIIVQSAKHPS---YVED 835
            .|.....:::|:...:.||.:|.|||||||||.|.:.||...|..|..|:|.|.:..:   |||.
  Fly   861 NTVRVESILDLLMMFVDEPLFDQLRTKEQLGYHVGATVRLNYGIAGYSIMVNSQETKTTADYVEG 925

  Fly   836 RIENFLQTYLQVIEDMPLDEFERHKEALAVKKLEKPKTIFQQFSQFYGEIAMQTYHFEREEAEVA 900
            |||.|....||::..:|.||:|..:::|...||.....:..:.|:.:.||..::|.|:|...::.
  Fly   926 RIEVFRAKMLQILRHLPQDEYEHTRDSLIKLKLVADLALSTEMSRNWDEIINESYLFDRRRRQIE 990

  Fly   901 ILRKISKADFVDYFKKFIAKDGEERRVLSVHIV-------------------------------- 933
            :||.:.|.:.:::   .|:.||:..|.|||.::                                
  Fly   991 VLRTLQKDEIINF---VISIDGDNMRKLSVQVIGHRPAGMPEPLCGEDTAKCASKSDDESESEND 1052

  Fly   934 ---SQQTDENATSEAEPVEITNMERHKP----------------------------ISDIVTFKS 967
               .:..:|..:||.|..|....|..|.                            |:||..||.
  Fly  1053 DDDDEDEEEEESSEEEEEEEKEKEGLKGEDEDDLFYSLENKLNIVFLPAKFNNAFIITDIEKFKD 1117

  Fly   968 CKELYP 973
            .:.:||
  Fly  1118 DQYVYP 1123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IdeNP_524182.3 Ptr 25..952 CDD:223956 277/1060 (26%)
Peptidase_M16 47..185 CDD:279066 58/188 (31%)
Peptidase_M16_C 211..386 CDD:282978 55/184 (30%)
Peptidase_M16_M 395..676 CDD:292805 64/304 (21%)
Peptidase_M16_C 680..863 CDD:282978 58/196 (30%)
Nrd1NP_572757.2 Ptr 54..1023 CDD:223956 272/1009 (27%)
Peptidase_M16 136..246 CDD:279066 47/109 (43%)
Peptidase_M16_C 289..472 CDD:282978 56/184 (30%)
Peptidase_M16_M 478..766 CDD:292805 64/304 (21%)
Peptidase_M16_C 769..953 CDD:282978 58/197 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445074
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1025
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1008844at2759
OrthoFinder 1 1.000 - - FOG0000548
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100422
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R767
SonicParanoid 00.000 Not matched by this tool.
76.680

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