DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ide and Nrdc

DIOPT Version :9

Sequence 1:NP_524182.3 Gene:Ide / 40248 FlyBaseID:FBgn0001247 Length:990 Species:Drosophila melanogaster
Sequence 2:XP_006238561.1 Gene:Nrdc / 25499 RGDID:3210 Length:1229 Species:Rattus norvegicus


Alignment Length:953 Identity:318/953 - (33%)
Similarity:509/953 - (53%) Gaps:45/953 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 DPNTDVSAAALSVQVGHMSDPTNLPGLAHFCEHMLFLGTEKYPHENGYTTYLSQSGGSSNAATYP 117
            :.:|.:|||||.|.||..:||.:|||||||.|||:|:|:.|||.|||:..:|.:.|||.||:|..
  Rat   284 ETDTVLSAAALCVGVGSFADPDDLPGLAHFLEHMVFMGSLKYPDENGFDAFLKKHGGSDNASTDC 348

  Fly   118 LMTKYHFHVAPDKLDGALDRFAQFFIAPLFTPSATEREINAVNSEHEKNLPSDLWRIKQVNRHLA 182
            ..|.:.|.|.......||||:|||||.||....|.:||:.||:||::...|||..|.:.:...||
  Rat   349 ERTVFQFDVQRKYFKEALDRWAQFFIHPLMIRDAIDREVEAVDSEYQLARPSDANRKEMLFGSLA 413

  Fly   183 KPDHAYSKFGSGNKTTLSEIPKSKNIDVRDELLKFHKQWYSANIMCLAVIGKESLDELEGMVLEK 247
            :|.|...||..||..||...||..|||....|.:|..::|||:.|.|.|..||:||.||..|.|.
  Rat   414 RPGHPMGKFFWGNAETLKHEPKKNNIDTHARLREFWMRYYSAHYMTLVVQSKETLDTLEKWVTEI 478

  Fly   248 FSEIENKNVKVPGWPR--HPYAEERYGQKVKIVPIKDIRSLTISFTTDDLTQFYKSGPDNYLTHL 310
            ||:|.|..:..|.:..  .|:....:.:..::|||:.|.:|||::......|.|:..|.:|::.|
  Rat   479 FSQIPNNGLPKPNFSHLTDPFDTPAFNKLYRVVPIRKIHALTITWALPPQQQHYRVKPLHYISWL 543

  Fly   311 IGHEGKGSILSELRRLGWCNDLMAGHQNT---QNG-FGFFDIVVDLTQEGLEHVDDIVKIVFQYL 371
            :||||||||||.||:..|...|..|:..|   ||. :..|.|.:.||.||.||..::...|||||
  Rat   544 VGHEGKGSILSYLRKKCWALALFGGNGETGFEQNSTYSVFSISITLTDEGYEHFYEVAHTVFQYL 608

  Fly   372 EMLRKEGPKKWIFDECVKLNEMRFRFKEKEQPENLVTHAVSSMQIFPLEEVLIAPYLSNEWRPDL 436
            :||:|.||:|.:|:|..|:.:..|.::|:..|...|.:...:||::|.::.|....|..|::|::
  Rat   609 KMLQKLGPEKRVFEEIQKIEDNEFHYQEQTDPVEYVENMCENMQLYPRQDFLTGDQLLFEYKPEV 673

  Fly   437 IKGLLDELVPSKSRIVIVSQSFEPDCDLAEPYYKTKYGITRVAKDTVQSWE-NCELNENLKLALP 500
            |...|::|||.|:.:|::|.:.|..|||.|.::.|:|.|..:.....:.|: |.:||.:|.|...
  Rat   674 IAEALNQLVPQKANLVLLSGANEGRCDLKEKWFGTQYSIEDIENSWTELWKSNFDLNSDLHLPAE 738

  Fly   501 NSFIPTNFDISDVPADAPKHPTIILDTPILRVWHKQDNQFNKPKACMTFDMSNPIAYLDPLNCNL 565
            |.:|.|:|.:........::|..|::||...:|:|:||:|..|||.:.|.:.:|:......|..|
  Rat   739 NKYIATDFTLKAFDCPETEYPAKIVNTPQGCLWYKKDNKFKIPKAYIRFHLISPLIQKSAANVVL 803

  Fly   566 NHMMVMLLKDQLNEYLYDAELASLKLSVMGKSCGIDFTIRGFSDKQVVLLEKLLDHLFDFSIDEK 630
            ..:.|.:|...|.|..|:|::|.|:..::....|:...::||:.|..:|.:.::|:|.:||....
  Rat   804 FDIFVNILTHNLAEPAYEADVAQLEYKLVAGEHGLIIRVKGFNHKLPLLFQLIIDYLTEFSSTPA 868

  Fly   631 RFDILKEEYVRSLKNFKAEQPYQHSIYYLALLLTENAWANME----LLDAMELVTYDRVLNFAKE 691
            .|.::.|:..::..|... :|...:.....|:|..:.|:.::    |:|.:.|   :.:|||.|:
  Rat   869 VFTMITEQLKKTYFNILI-KPETLAKDVRLLILEYSRWSMIDKYRALMDGLSL---ESLLNFVKD 929

  Fly   692 FFQRLHTECFIFGNVTKQQATDIAGRVNTRLEATNASKLPILARQMLKKREYKLLAGDSYLFEKE 756
            |..:|..|..:.||||..::.|....|..:|     :.:| |.|:|..:.:...|....:|.:..
  Rat   930 FKSQLFVEGLVQGNVTSTESMDFLRYVVDKL-----NFVP-LEREMPVQFQVVELPSGHHLCKVR 988

  Fly   757 --NEFHKSSCAQLYLQCGAQTDHTNIMVNLVSQVLSEPCYDCLRTKEQLGYIVFSGVRKVNGANG 819
              |:...:|...:|.|.|.::.....::.|:...:.|||:|.||||:.|||.|:...|..:|..|
  Rat   989 ALNKGDANSEVTVYYQSGTRSLREYTLMELLVMHMEEPCFDFLRTKQTLGYHVYPTCRNTSGILG 1053

  Fly   820 IRIIV--QSAKHPS-YVEDRIENFLQTYLQVIEDMPLDEFERHKEALAVKKLEKPKTIFQQFSQF 881
            ..:.|  |:.|:.| .|:.:||.||.::.:.||::..|.|.....||...|..:...:.::..:.
  Rat  1054 FSVTVGTQATKYNSETVDKKIEEFLSSFEEKIENLTEDAFNTQVTALIKLKECEDTHLGEEVDRN 1118

  Fly   882 YGEIAMQTYHFEREEAEVAILRKISKADFVDYFKKFIAKDGEERRVLSVHIV---SQQTDENATS 943
            :.|:..|.|.|:|...|:..|:..||:|.|.:||   |..|...::||||:|   ..:.:|:...
  Rat  1119 WNEVVTQQYLFDRLAHEIEALKSFSKSDLVSWFK---AHRGPGSKMLSVHVVGYGKYELEEDGAP 1180

  Fly   944 EAE-------------PVEITNMERHKPISDIVTFKSCKELYP 973
            ..|             |......|...||:||..|.:...|:|
  Rat  1181 VCEDPNSREGMQLIYLPPSPLLAESTTPITDIRAFTATLSLFP 1223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IdeNP_524182.3 Ptr 25..952 CDD:223956 310/930 (33%)
Peptidase_M16 47..185 CDD:279066 63/131 (48%)
Peptidase_M16_C 211..386 CDD:282978 72/180 (40%)
Peptidase_M16_M 395..676 CDD:292805 78/285 (27%)
Peptidase_M16_C 680..863 CDD:282978 54/187 (29%)
NrdcXP_006238561.1 Ptr 290..1168 CDD:223956 305/890 (34%)
Peptidase_M16 290..416 CDD:279066 62/125 (50%)
Peptidase_M16_C 441..627 CDD:282978 73/185 (39%)
Peptidase_M16_M 632..913 CDD:292805 77/281 (27%)
Peptidase_M16_C 918..1100 CDD:282978 55/190 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1025
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG63000
OrthoDB 1 1.010 - - D1008844at2759
OrthoFinder 1 1.000 - - FOG0000548
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100422
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.730

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