DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Toll-9 and AT1G69550

DIOPT Version :10

Sequence 1:NP_649214.1 Gene:Toll-9 / 40245 FlyBaseID:FBgn0036978 Length:900 Species:Drosophila melanogaster
Sequence 2:NP_564971.2 Gene:AT1G69550 / 843291 AraportID:AT1G69550 Length:1400 Species:Arabidopsis thaliana


Alignment Length:721 Identity:144/721 - (19%)
Similarity:249/721 - (34%) Gaps:243/721 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 VSKERTDLK--SLMLKYESDDGNSCLLDLIKDEVIWW----QFPN--GTLRDSTKKYAH----KL 102
            ::..|.||.  |.:::..|..||  |::|.:.:::..    :.|:  |.|.:....|.|    .|
plant   764 ITLPRLDLMGCSSLVELPSSIGN--LINLPRLDLMGCSSLVELPSSIGNLINLEAFYFHGCSSLL 826

  Fly   103 YLDLSHGNLKDDSDLFREAKLSRKVTIWR-----TEVFSAAFNTLTAAPFRTLYSMRESLKLLSL 162
            .|..|.|||           :|.|:...:     .|:.|:..|.:             :||||:|
plant   827 ELPSSIGNL-----------ISLKILYLKRISSLVEIPSSIGNLI-------------NLKLLNL 867

  Fly   163 RGNNFAELIPDAEDFARFVNESRLEASNSVPHHCELLL--------LHNTTDLYDREC------- 212
            .|  .:.|:.........:|..:|:.|.     |..|:        |.|..:||..||       
plant   868 SG--CSSLVELPSSIGNLINLKKLDLSG-----CSSLVELPLSIGNLINLQELYLSECSSLVELP 925

  Fly   213 ----------------------------------YLYFNNNTNMGQSITTGRNYTNFIKVLKDRF 243
                                              .||.:..:::.:..::..|..|..|:     
plant   926 SSIGNLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKL----- 985

  Fly   244 DQHGSSSQSIAWATFPKMPRLVELDISNCSIEYVSKEAFRNVSNLRRLFMSDNKIMTISHDTFYY 308
            |..|.||......:...:..|..|::|.||.......:..|:.||:.|::|:...:.....:...
plant   986 DLSGCSSLVELPLSIGNLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGN 1050

  Fly   309 VQGVQYLDLSFTNFLTYSYQLQLPTLEMALSLIYGLKIQQNVFKYLPELIYLDLSHSKMTRNSAV 373
            :..::.||||..:.|     ::||   :::..:..||.             |:||..........
plant  1051 LINLKKLDLSGCSSL-----VELP---LSIGNLINLKT-------------LNLSGCSSLVELPS 1094

  Fly   374 AFAHLGDKLKFLSLCYTAIPMVSSTIFKNTV-LEGLDLSG------NPYLSYNIIDDAFDGIANT 431
            :..:|..|...||.|.:.:.:.||  ..|.: |:.|||||      .|....|:|:         
plant  1095 SIGNLNLKKLDLSGCSSLVELPSS--IGNLINLKKLDLSGCSSLVELPLSIGNLIN--------- 1148

  Fly   432 LKYLYF-ERSNIKDLEWS-KSLKNLQVLGLA------------GNNIN----------------- 465
            |:.||. |.|::.:|..| .:|.|||.|.|:            ||.||                 
plant  1149 LQELYLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKLDLNKCTKLVSLPQ 1213

  Fly   466 ---ALTPAMFQSLESLEILDLSSNHVGNWYR--SAFHNNSALRVLNLRSNTIN--MLSNEMLKDF 523
               :|:..:.:|.||||.|..|..:...|.:  ..:..|...|.:.::::|.|  ||....:..|
plant  1214 LPDSLSVLVAESCESLETLACSFPNPQVWLKFIDCWKLNEKGRDIIVQTSTSNYTMLPGREVPAF 1278

  Fly   524 ERLDY-------LSLGDNDFIC--DCHLRAVVEVAAANNKDADCSYRLLNYSQNAVGEEVISLAE 579
              ..|       |::..|:..|  .|..:|.:.:....:|                         
plant  1279 --FTYRATTGGSLAVKLNERHCRTSCRFKACILLVRKGDK------------------------- 1316

  Fly   580 SLIIDRKLWQSRYIPWLQ----RSYS-------------------NIREFNRANHIIKLRFSSED 621
               ||.:.|.|.|:..|:    |.||                   ..:.......:||.:|..:.
plant  1317 ---IDCEEWGSVYLTVLEKQSGRKYSLESPTLYPLLTEHLYTFEIEAKGVKSVELVIKFQFGRKK 1378

  Fly   622 YMVAKC 627
            :.:.:|
plant  1379 WEIGEC 1384

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Toll-9NP_649214.1 LRR 198..537 CDD:443914 91/439 (21%)
leucine-rich repeat 264..287 CDD:275380 6/22 (27%)
leucine-rich repeat 288..311 CDD:275380 3/22 (14%)
leucine-rich repeat 312..356 CDD:275380 9/43 (21%)
leucine-rich repeat 357..381 CDD:275380 4/23 (17%)
leucine-rich repeat 382..397 CDD:275380 3/14 (21%)
leucine-rich repeat 405..430 CDD:275380 9/30 (30%)
leucine-rich repeat 432..453 CDD:275380 8/22 (36%)
leucine-rich repeat 454..477 CDD:275380 10/54 (19%)
leucine-rich repeat 478..501 CDD:275380 6/24 (25%)
leucine-rich repeat 502..525 CDD:275380 6/24 (25%)
TIR 751..891 CDD:214587
AT1G69550NP_564971.2 PLN03210 76..1059 CDD:215633 63/332 (19%)
leucine-rich repeat 695..718 CDD:275380
leucine-rich repeat 719..741 CDD:275380