DRSC/TRiP Functional Genomics Resources

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Protein Alignment Toll-9 and RLM3

DIOPT Version :9

Sequence 1:NP_001246846.1 Gene:Toll-9 / 40245 FlyBaseID:FBgn0036978 Length:900 Species:Drosophila melanogaster
Sequence 2:NP_001329873.1 Gene:RLM3 / 827407 AraportID:AT4G16990 Length:801 Species:Arabidopsis thaliana


Alignment Length:935 Identity:161/935 - (17%)
Similarity:295/935 - (31%) Gaps:328/935 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 NVREAYTEFSIQDGLIIEPDSATTSSEEAEEVSKERTDLKSLMLKYESD------------DGNS 71
            |.|......|:...|..|.|....::.....:.:.|.....|:|..|:.            ....
plant    14 NFRGEDVRHSLVSHLRKELDRKFINTFNDNRIERSRKITPELLLAIENSRISLVVFSKNYASSTW 78

  Fly    72 CLLDLIK--------DEV---IWWQFPNGTLRDSTKKYAHKLYLDLSHGNLKDDSDLFREAKLSR 125
            ||.:|:|        |::   |:::.....:|..|.::. .::.:...|..:::         .|
plant    79 CLDELVKIQECYEKLDQMVIPIFYKVDPSHVRKQTGEFG-MVFGETCKGRTENE---------KR 133

  Fly   126 KVTIWRTEVFSAAFNTLTAAPFRTLYSMRESLKLLSLRGNNFAELIPDAEDFARFVN-ESRLEAS 189
            |   |...:...|.  |.....|...|..|.|:.::...:|  :|.|.:.:|:.||. |:.:||.
plant   134 K---WMRALAEVAH--LAGEDLRNWRSEAEMLENIAKDVSN--KLFPPSNNFSDFVGIEAHIEAL 191

  Fly   190 NSVPHHCELLLLHNTTDLYDRE-------CYLYFNNNTNMGQSITT-------GRNYTNFIKVLK 240
            .|:..             :|.:       |.......|.:|:::.:       .|.:..:.:.::
plant   192 ISMLR-------------FDSKKARMIGICGPSETGKTTIGRALYSRLKSDFHHRAFVAYKRKIR 243

  Fly   241 DRFDQHGSSSQSIAWATFPKMPRLVELD--ISNC-SIEYVSK--------------EAFRNVSNL 288
            ..:|      |.:.|........|.:.|  |..| ::|...|              |..:.:...
plant   244 SDYD------QKLYWEEQFLSEILCQKDIKIEECGAVEQRLKHTKVLIVLDDVDDIELLKTLVGR 302

  Fly   289 RRLFMSDNKIMTISHDTFYYVQGVQYLDLSFTNFLTYSYQLQLPTLEMALSLI----YGLKIQQN 349
            .|.|.|::||:.|:          |..:|...:.:.:.|::..|:.|:|..:.    :|.....:
plant   303 IRWFGSESKIVVIT----------QKRELLKAHNIAHVYEVGFPSEELAHQMFCRYAFGKNSPPH 357

  Fly   350 VFKYLPE------------LIYLDLSHSKMTRNSAV----AFAHLGDKLKFLSLCYTAIPMVSST 398
            .|..|.:            |.|:..|..::.:...|    .|...|:|||   :.|         
plant   358 GFNELADEAAKIAGNRPKALKYVGSSFRRLDKEQWVKMLSEFRSNGNKLK---ISY--------- 410

  Fly   399 IFKNTVLEGLDLSGNPYLS------------------------YNIIDDAFDGIANTLKYLYFER 439
                   :.||..|..|::                        .||..|.    ...||:|.:.|
plant   411 -------DELDGKGQDYVACLTNGSNSQVKAEWIHLALGVSILLNIRSDG----TTILKHLSYNR 464

  Fly   440 SNIKDLE--WSKSL----KNLQVLGLAGNNINALTPAMFQSLESLEILDLSSNHVGNWY----RS 494
            |..:..:  |.::|    |...:.|                      :|.|::..|:.|    .|
plant   465 SMAQQAKIWWYENLERVCKKYNICG----------------------IDSSTDGGGSTYGQCSNS 507

  Fly   495 AFHNNSALRVLNLRSNTINMLSNEMLKDF--------ERLDYLSLGDNDFICDCHLRAVVEVAAA 551
            .|..|..      .|...|..||:..||.        |:::|         |:.|    |.:..|
plant   508 QFQRNMD------ASPGGNKTSNQSTKDSPRASQVEKEKIEY---------CEPH----VYITPA 553

  Fly   552 NNKDADCSYRLLNYSQNAVGEEVISLAESLIIDRKLWQSRYIPWLQRSYSNIREFNR-------- 608
            ...|...:.:.:..|...|.:         :...|.|.......:..:::||...:|        
plant   554 IFSDGTRAPKYVESSSRRVTQ---------VHHAKTWWPENCEKVYENHNNIYGIDRSIDGGDKF 609

  Fly   609 -----------------------ANHIIKLRFSSE-------------DYMVAKCSAAQPYHLGD 637
                                   :|..:::...::             :|.|...:|..|..|.|
plant   610 EGKSKVSDGGLDGKDQGSMYGQSSNSELQINMDADNRRCEPVSEMLFKNYNVCSPNAHMPAGLTD 674

  Fly   638 LDG---------DLTLKFQLLDYE-----ASQYYCFNNTDQL----QVDELNCQIRSMSDLAEEL 684
            ::.         |.:||...:.:|     :..::.|.....:    ||||.|            .
plant   675 VNCSNPQSQRKLDASLKKDKIVHEWIRTGSGFFFDFQGPKSIVSAAQVDEKN------------F 727

  Fly   685 HHVTNTVIAVMGSLVGACILGFIIYLKRWHIHYYYSSLKSAALLSSASKESVNKFTNISQRDPS- 748
            .:....|...:|.|.|.     ||.||  |:.:.....:.|.:..|.:...|.:..||...|.| 
plant   728 EYCEQGVYITLGILSGG-----IIVLK--HLEFSRRMAQQAKVWWSENWIKVYQEHNICGIDKSF 785

  Fly   749 -AVYDIFISYCQNDRTWVLNELLPN 772
             ..:|        ||. |:.:|.||
plant   786 DGRFD--------DRR-VIRQLRPN 801

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Toll-9NP_001246846.1 leucine-rich repeat 157..185 CDD:275380 8/28 (29%)
LRR_8 262..322 CDD:290566 15/76 (20%)
leucine-rich repeat 264..287 CDD:275380 7/39 (18%)
leucine-rich repeat 288..311 CDD:275380 6/22 (27%)
leucine-rich repeat 312..356 CDD:275380 9/47 (19%)
LRR_8 <344..387 CDD:290566 11/58 (19%)
leucine-rich repeat 357..381 CDD:275380 6/27 (22%)
leucine-rich repeat 382..397 CDD:275380 3/14 (21%)
leucine-rich repeat 405..430 CDD:275380 7/48 (15%)
LRR_8 431..488 CDD:290566 11/62 (18%)
leucine-rich repeat 432..453 CDD:275380 7/26 (27%)
LRR_RI <449..536 CDD:238064 18/102 (18%)
leucine-rich repeat 454..477 CDD:275380 1/22 (5%)
LRR_8 477..536 CDD:290566 15/70 (21%)
leucine-rich repeat 478..501 CDD:275380 7/26 (27%)
leucine-rich repeat 502..525 CDD:275380 6/30 (20%)
TIR 751..891 CDD:214587 7/22 (32%)
RLM3NP_001329873.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 44 1.000 Domainoid score I4673
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282372at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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