DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Toll-9 and tlr4al

DIOPT Version :9

Sequence 1:NP_001246846.1 Gene:Toll-9 / 40245 FlyBaseID:FBgn0036978 Length:900 Species:Drosophila melanogaster
Sequence 2:NP_001315534.1 Gene:tlr4al / 795671 ZFINID:ZDB-GENE-090507-2 Length:816 Species:Danio rerio


Alignment Length:914 Identity:198/914 - (21%)
Similarity:315/914 - (34%) Gaps:350/914 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 LYFNNNTNMGQSIT----------TGRNYTNFIKVLKDRFDQHGSSSQSIAW---ATFPKMPRLV 265
            :||  ....|||.|          .|||.:.....:.........|...:.|   ..||....|.
Zfish    11 IYF--PIGAGQSCTEIIENLHYSCMGRNLSYIPSRIPSSVQTLDFSFNDLKWLKKTVFPVFTFLR 73

  Fly   266 ELDISNCSIEYVSKEAFRNVSNLRRLFMSDNKIMTISH---DTFYYVQ-------GVQYLDLSFT 320
            .||:|.|.|..:..:||.||.||..||::.|.|:..:.   :|.|.:|       |::.|.|:..
Zfish    74 VLDLSRCHIRQIENDAFYNVKNLTTLFLTGNPIIYFAPGCLNTLYNLQRLVLVDIGLESLQLNIN 138

  Fly   321 NF---------LTYSYQLQLP-------------------------------------TL----- 334
            |.         ..|...:.||                                     ||     
Zfish   139 NLTKLQELNVGTNYIQSMTLPPFMSTFKDFSLLDLHANNISIIRTNHTVVLREIGKNMTLILSRN 203

  Fly   335 ------------------------------EMALSLIYGLKI----------------------- 346
                                          :..|:.::||.:                       
Zfish   204 PLLHIEPGSFKGVHLVELDIRSTFVSFASKKQGLNGLHGLNVTRLMFGMYKDDPKLYPSDLDYFD 268

  Fly   347 --------------------QQNVFK-------------------YLP----ELIYL-------- 360
                                :.|:|:                   |:|    :.:||        
Zfish   269 GLCSIHFYEAYYYMKERLDWKMNIFRCMINATVVVVKGGVIRVIGYVPFHKIKELYLINTQLYTV 333

  Fly   361 ---DLSHSK------MTRNSAVAFAHLGD--KLKFLSLCYTAIPMVSSTIFKNTVLEG------L 408
               .|||.:      .|.|||.......|  ||:::.|....|.:.|..|   .||.|      |
Zfish   334 PGKQLSHIRTLEKFVFTHNSATQVEKFLDMPKLQYVDLNSNQITLQSCCI---DVLSGTPQIRYL 395

  Fly   409 DLSGNPYLSYNIIDDAFDGIANTLKYLYFER------------SNIK-----DLEWSK------- 449
            :||.||.:|.:  ...|:|: .:|:.|.|..            ||:|     |:.:|.       
Zfish   396 NLSLNPQISLD--KGGFEGL-ESLEILDFHHTKLLGIGSFTLLSNLKNLRYLDISYSSVTFVNVY 457

  Fly   450 ---SLKNLQVLGLAGNNINA-LTPAMFQSLESLEILDLSSNHVGNWYRSAFHNNSALRVLNLRSN 510
               .|.:|:||.:|||:... :...:|.:|..||.||:|..||...:.::|.|...||.||||.|
Zfish   458 CFYGLSSLKVLKMAGNSFQGDVANYLFNNLTFLEHLDISYCHVIEIHLTSFKNLQRLRHLNLRGN 522

  Fly   511 TINMLSNEMLKDFERLDYLSLGDNDFICDCHLRAVVEVAAANNKDADCSYRLLNYSQNAVGEEVI 575
              |::|                 .||:.|.:|:                 :|..:..|......|
Zfish   523 --NLMS-----------------IDFLTDPNLK-----------------QLTTFYVNKNSITTI 551

  Fly   576 SLAESLIIDRKLWQSRYIPWLQRSYSNIREFNRANHIIKLRFSSEDYMVAKCSAAQPYHLGDLDG 640
            .|                ..||:...|:.||:.:.:.|....|..|:|:                
Zfish   552 PL----------------DILQKLPMNLSEFDLSFNPIDCSCSQTDFML---------------- 584

  Fly   641 DLTLKFQLLDYEASQYYCFNNTDQL-QVDELNCQ-IRSMSDLAE---ELHHVT---NTVIAVM-G 696
                            :..||...| |.:.:.|: |...||...   ::.|..   ..:||:: .
Zfish   585 ----------------WIINNQRVLKQPENILCKTISPNSDFRVTDFDIDHCVYKKKLIIALLVF 633

  Fly   697 SLVGACILGFIIYLKRWHIHYYYSSLKSAALLSSASKESVNKFTNISQRDPSAVYDIFISYCQND 761
            .:|...:|..::|..::::.|.:..|:.              :.:..|::.|  ||.|:.:...|
Zfish   634 CVVFIVVLSILVYRFQFYLRYCWILLRG--------------YRSPGQQECS--YDAFVIFSSYD 682

  Fly   762 RTWVLNELLPNVEE-TGDVSICLHERDFQIGVTILDNIISCMDR----SYSLMLIISSKFLLSHW 821
            ..||:|||:.|:|. ...:.:|||.||||.|.:|..|||   |.    |..:::::|..|:.|.|
Zfish   683 EAWVMNELMENLENGVPPIQLCLHMRDFQAGKSIASNII---DEGIMGSRKIIVVVSQHFIDSAW 744

  Fly   822 CQFEMYLAQHRIFEVSKEHLILVFLEDIPRRKRPKTLQYLMDVK--TYIKWPTAKEDRKLFWKRL 884
            |:||..|||.|.......::|::.|||:..||..|.|.....:|  ||:||.........||.||
Zfish   745 CRFEFELAQSRFVVERNANIIIIILEDVAERKTKKVLGLHKHLKKNTYLKWSRDPLSNMRFWIRL 809

  Fly   885 KRSL 888
            ::::
Zfish   810 RKAI 813

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Toll-9NP_001246846.1 leucine-rich repeat 157..185 CDD:275380
LRR_8 262..322 CDD:290566 22/69 (32%)
leucine-rich repeat 264..287 CDD:275380 10/22 (45%)
leucine-rich repeat 288..311 CDD:275380 8/32 (25%)
leucine-rich repeat 312..356 CDD:275380 15/190 (8%)
LRR_8 <344..387 CDD:290566 17/127 (13%)
leucine-rich repeat 357..381 CDD:275380 10/42 (24%)
leucine-rich repeat 382..397 CDD:275380 3/14 (21%)
leucine-rich repeat 405..430 CDD:275380 10/30 (33%)
LRR_8 431..488 CDD:290566 22/84 (26%)
leucine-rich repeat 432..453 CDD:275380 9/47 (19%)
LRR_RI <449..536 CDD:238064 27/97 (28%)
leucine-rich repeat 454..477 CDD:275380 8/23 (35%)
LRR_8 477..536 CDD:290566 18/58 (31%)
leucine-rich repeat 478..501 CDD:275380 9/22 (41%)
leucine-rich repeat 502..525 CDD:275380 9/22 (41%)
TIR 751..891 CDD:214587 53/145 (37%)
tlr4alNP_001315534.1 leucine-rich repeat 28..47 CDD:275380 3/18 (17%)
leucine-rich repeat 48..71 CDD:275380 4/22 (18%)
LRR_8 72..127 CDD:290566 19/54 (35%)
leucine-rich repeat 72..95 CDD:275380 10/22 (45%)
leucine-rich repeat 96..119 CDD:275380 6/22 (27%)
leucine-rich repeat 120..142 CDD:275380 5/21 (24%)
leucine-rich repeat 143..168 CDD:275380 3/24 (13%)
leucine-rich repeat 170..196 CDD:275380 0/25 (0%)
leucine-rich repeat 321..343 CDD:275380 5/21 (24%)
LRR_RI 364..>524 CDD:238064 50/167 (30%)
LRR_8 364..426 CDD:290566 20/67 (30%)
leucine-rich repeat 366..391 CDD:275380 8/27 (30%)
leucine-rich repeat 392..415 CDD:275380 8/25 (32%)
LRR_8 415..475 CDD:290566 15/59 (25%)
leucine-rich repeat 416..440 CDD:275380 5/23 (22%)
leucine-rich repeat 441..464 CDD:275380 3/22 (14%)
leucine-rich repeat 465..489 CDD:275380 8/23 (35%)
leucine-rich repeat 490..513 CDD:275380 9/22 (41%)
LRR_4 512..552 CDD:289563 15/75 (20%)
LRR_8 513..573 CDD:290566 22/111 (20%)
leucine-rich repeat 514..537 CDD:275380 13/58 (22%)
leucine-rich repeat 538..562 CDD:275380 6/39 (15%)
TIR 672..813 CDD:214587 53/143 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm24216
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24365
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.020

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