DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Toll-9 and TLR4

DIOPT Version :9

Sequence 1:NP_001246846.1 Gene:Toll-9 / 40245 FlyBaseID:FBgn0036978 Length:900 Species:Drosophila melanogaster
Sequence 2:NP_612564.1 Gene:TLR4 / 7099 HGNCID:11850 Length:839 Species:Homo sapiens


Alignment Length:938 Identity:208/938 - (22%)
Similarity:331/938 - (35%) Gaps:326/938 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 LLDLIKDEVIWWQFPNGTLRDSTKKYAHKLYLDLSH-------GNLKDDSDLFREAKLSRKVTIW 130
            :|||.:.|:       .|:.|..       |..|||       ||......|...:.||....:.
Human    82 VLDLSRCEI-------QTIEDGA-------YQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 132

  Fly   131 RTEVFSAAFNTLTAAPFRTL------YSMRESLKLLSLRGNNFAELIPDAEDFARFVNESRLE-A 188
            ..|...|:.........:||      :::.:|.||              .|.|:...|...|: :
Human   133 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKL--------------PEYFSNLTNLEHLDLS 183

  Fly   189 SNSVPH-HC-ELLLLHNTTDLYDRECYLYFNNNTNMGQSITTGRNYTNFIK------------VL 239
            ||.:.. :| :|.:||....|           |.::..|:    |..|||:            .|
Human   184 SNKIQSIYCTDLRVLHQMPLL-----------NLSLDLSL----NPMNFIQPGAFKEIRLHKLTL 233

  Fly   240 KDRFDQHGSSSQSIAWATFPKMPRLVELDISN-CSIEYVSKEAFRNVSNLR----RL-----FMS 294
            ::.||........|......::.|||..:..| .::|...|.|...:.||.    ||     ::.
Human   234 RNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLD 298

  Fly   295 D-----NKIMTISH-----------DTFYYVQGVQYLDLSFTNFLTYSYQLQLPTLEM--ALSLI 341
            |     |.:..:|.           ..|.|..|.|:|:|....|      .|.|||::  ...|.
Human   299 DIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKF------GQFPTLKLKSLKRLT 357

  Fly   342 YGLKIQQNVFKY--LPELIYLDLSHSKMTRNSAVAFAHLGDKLKFLSLCYTAIPMVSSTIFKNTV 404
            :......|.|..  ||.|.:||||     ||.          |.|...|       |.:.|..|.
Human   358 FTSNKGGNAFSEVDLPSLEFLDLS-----RNG----------LSFKGCC-------SQSDFGTTS 400

  Fly   405 LEGLDLSGNPYLSYNIIDDAFDGIANTLKYLYFERSNIKDL-EWS-------------------- 448
            |:.||||.|..::   :...|.|: ..|::|.|:.||:|.: |:|                    
Human   401 LKYLDLSFNGVIT---MSSNFLGL-EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV 461

  Fly   449 ------KSLKNLQVLGLAGNNINA-LTPAMFQSLESLEILDLSSNHVGNWYRSAFHNNSALRVLN 506
                  ..|.:|:||.:|||:... ..|.:|..|.:|..||||...:.....:||::.|:|:|||
Human   462 AFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 526

  Fly   507 LRSN---TINMLSNEMLKDFERLDY----------------------LSLGDNDFICDCHLRAVV 546
            :..|   :::....:.|...:.|||                      |:|..|||.|.|.     
Human   527 MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE----- 586

  Fly   547 EVAAANNKDADCSYRLLNYSQNAVGEEVISLAESLIIDRKLWQSRYIPWL--QRSYSNIREFNRA 609
                                                      ...::.|:  ||           
Human   587 ------------------------------------------HQSFLQWIKDQR----------- 598

  Fly   610 NHIIKLRFSSEDYMVAKCSAAQPYHLGDLDGDLTLKFQLLDYEASQYYCFNNTDQ--LQVDELN- 671
                                                 ||| .|..:..|...:|:  :.|..|| 
Human   599 -------------------------------------QLL-VEVERMECATPSDKQGMPVLSLNI 625

  Fly   672 -CQIRSMSDLAEELHHVTNTVIAV-MGSLVGACILGFIIYLKRWHIHYYYSSLKSAALLSSASKE 734
             ||             :..|:|.| :.|::...::..::|      .:|:..:..|..:.....|
Human   626 TCQ-------------MNKTIIGVSVLSVLVVSVVAVLVY------KFYFHLMLLAGCIKYGRGE 671

  Fly   735 SVNKFTNISQRDPSAVYDIFISYCQNDRTWVLNELLPNVEE-TGDVSICLHERDFQIGVTILDNI 798
            :              :||.|:.|...|..||.|||:.|:|| .....:|||.|||..||.|..||
Human   672 N--------------IYDAFVIYSSQDEDWVRNELVKNLEEGVPPFQLCLHYRDFIPGVAIAANI 722

  Fly   799 I-SCMDRSYSLMLIISSKFLLSHWCQFEMYLAQHRIFEVSKEHLILVFLEDIPRR--KRPKTLQY 860
            | ....:|..:::::|..|:.|.||.||..:||...|..|:..:|.:.|:.:.:.  ::...|..
Human   723 IHEGFHKSRKVIVVVSQHFIQSRWCIFEYEIAQTWQFLSSRAGIIFIVLQKVEKTLLRQQVELYR 787

  Fly   861 LMDVKTYIKWPTAKEDRKLFWKRLKRSL 888
            |:...||::|..:...|.:||:||:::|
Human   788 LLSRNTYLEWEDSVLGRHIFWRRLRKAL 815

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Toll-9NP_001246846.1 leucine-rich repeat 157..185 CDD:275380 5/27 (19%)
LRR_8 262..322 CDD:290566 20/85 (24%)
leucine-rich repeat 264..287 CDD:275380 6/23 (26%)
leucine-rich repeat 288..311 CDD:275380 8/47 (17%)
leucine-rich repeat 312..356 CDD:275380 12/47 (26%)
LRR_8 <344..387 CDD:290566 13/44 (30%)
leucine-rich repeat 357..381 CDD:275380 7/23 (30%)
leucine-rich repeat 382..397 CDD:275380 3/14 (21%)
leucine-rich repeat 405..430 CDD:275380 8/24 (33%)
LRR_8 431..488 CDD:290566 23/84 (27%)
leucine-rich repeat 432..453 CDD:275380 9/47 (19%)
LRR_RI <449..536 CDD:238064 30/112 (27%)
leucine-rich repeat 454..477 CDD:275380 9/23 (39%)
LRR_8 477..536 CDD:290566 20/83 (24%)
leucine-rich repeat 478..501 CDD:275380 7/22 (32%)
leucine-rich repeat 502..525 CDD:275380 6/25 (24%)
TIR 751..891 CDD:214587 50/142 (35%)
TLR4NP_612564.1 LRR_RI 55..>195 CDD:238064 29/140 (21%)
LRR 1 55..76
leucine-rich repeat 56..79 CDD:275378
LRR_8 57..114 CDD:290566 12/45 (27%)
LRR 2 79..100 7/31 (23%)
leucine-rich repeat 80..103 CDD:275378 8/34 (24%)
LRR_8 102..187 CDD:290566 20/98 (20%)
LRR 3 103..124 4/20 (20%)
leucine-rich repeat 104..127 CDD:275378 4/22 (18%)
LRR 4 127..148 2/20 (10%)
leucine-rich repeat 128..176 CDD:275378 9/61 (15%)
leucine-rich repeat 130..151 CDD:275380 2/20 (10%)
LRR 5 151..172 6/34 (18%)
LRR_RI 152..456 CDD:238064 84/364 (23%)
LRR 6 176..199 6/22 (27%)
leucine-rich repeat 177..190 CDD:275378 3/12 (25%)
leucine-rich repeat 195..224 CDD:275380 10/43 (23%)
LRR 7 205..225 6/23 (26%)
LRR 8 227..247 3/19 (16%)
LRR 9 331..351 9/25 (36%)
LRR 10 352..373 3/20 (15%)
leucine-rich repeat 353..374 CDD:275380 4/20 (20%)
LRR_RI <372..581 CDD:238064 61/234 (26%)
LRR 11 374..394 11/41 (27%)
LRR_8 399..458 CDD:290566 17/62 (27%)
LRR 12 400..422 8/25 (32%)
leucine-rich repeat 401..423 CDD:275380 8/25 (32%)
LRR 13 423..444 8/20 (40%)
leucine-rich repeat 424..448 CDD:275380 8/23 (35%)
LRR_8 447..508 CDD:290566 15/60 (25%)
LRR 14 448..456 0/7 (0%)
leucine-rich repeat 449..472 CDD:275380 1/22 (5%)
LRR 15 472..495 8/22 (36%)
leucine-rich repeat 473..497 CDD:275380 9/23 (39%)
LRR 16 497..518 7/20 (35%)
leucine-rich repeat 498..521 CDD:275380 7/22 (32%)
LRR_8 520..581 CDD:290566 13/60 (22%)
LRR 17 521..542 5/20 (25%)
LRR 18 545..565 3/19 (16%)
leucine-rich repeat 546..570 CDD:275380 3/23 (13%)
LRRCT 579..625 CDD:214507 16/141 (11%)
TIR 674..815 CDD:214587 49/140 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24365
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
33.020

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