DRSC/TRiP Functional Genomics Resources

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Protein Alignment Toll-9 and tlr4bb

DIOPT Version :9

Sequence 1:NP_001246846.1 Gene:Toll-9 / 40245 FlyBaseID:FBgn0036978 Length:900 Species:Drosophila melanogaster
Sequence 2:NP_997978.2 Gene:tlr4bb / 403132 ZFINID:ZDB-GENE-040219-9 Length:819 Species:Danio rerio


Alignment Length:856 Identity:181/856 - (21%)
Similarity:312/856 - (36%) Gaps:245/856 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   219 NTNMGQSIT----------TGRNYT-----------------NFIKVLKDRFDQHGSSSQSIAWA 256
            |...||..|          :|||.|                 ||:..|..|              
Zfish    20 NAGQGQECTELIKNKEYSCSGRNLTCIPGSLPFSVASLDFSFNFLTSLHKR-------------- 70

  Fly   257 TFPKMPRLVELDISNCSIEYVSKEAFRNVSNLRRLFMSDNKIMTISHD---TFYYVQGVQYLDLS 318
            .||.|..|..||::.|.|..:.|:||.||.||..|.::.|.|..::.:   :.|.:|.:..:|:.
Zfish    71 VFPVMLNLQLLDLTRCYIRQIEKDAFYNVKNLMTLILTGNPITYLAPECLNSLYKLQRLVLVDVR 135

  Fly   319 FTNFLTYSYQLQLPTLEMALSLIYGLKIQQNVFKYLPELI--YLDLSHSKMTRN--SAVAFAH-- 377
            ..     |.|||:..|.....|..|....|::  .||..:  :.|.|...:..|  |.:...|  
Zfish   136 LE-----SLQLQINNLTKLQDLKVGTNCIQSM--TLPSFMSTFKDFSLLDLHANNISIIRMDHTA 193

  Fly   378 -LGDKLKFLSLCYTAIPM--VSSTIFKNTVLEGLDLSGNPYLSYNI------------------- 420
             |.:..:.::|..:..|:  :....||:.:|..|.|.. .::|:|.                   
Zfish   194 VLREIGRNMTLILSRNPLIHIEPGAFKDVILRELHLLA-AFISFNAQKECHKALTGLTVDKLFVG 257

  Fly   421 -----------IDDAFDGIA--------------------------------------NTLKYLY 436
                       :.|..:|:.                                      |::|::.
Zfish   258 RYRMDEKIKVSVPDYLEGLCSINFNEIYLVQKEWSDSEMHLFRCMVNATKITIKKAYMNSMKHIP 322

  Fly   437 FER-----------------SNIKDLE-------------WSKSLKNLQVLGLAGNN--INALTP 469
            |.|                 |:|..||             ....|..||.:.|:||.  ::....
Zfish   323 FHRLKELYLSDTGLSVVPFISHIPSLEKLVMKSPFPITFTGVSDLPLLQYVDLSGNMLILHECCS 387

  Fly   470 AMFQSLESLEILDLSSNHVGNWYRSAFHNNSALRVLNL-RSNTINMLSNEMLKDFERLDYLSLG- 532
            .:|....:::.|:||.|....:....|.....|.||:. .:..:.:......|....|.||.:. 
Zfish   388 ILFPRTPNIQYLNLSQNSEITFVNEPFSALDLLEVLDFHHTKLVIVFYFGFFKHLRNLKYLDISY 452

  Fly   533 -----DNDFICDCHLRAVVEVAAANNKDADCSYRLLNYSQNAVGEEVISLAE---------SLII 583
                 :.....|.|...|::: |.|:...|   :|..:.||....||:.:::         |...
Zfish   453 TRVHFNTLTFQDLHNLTVLKM-AGNSFSGD---KLSYFLQNLTSLEVLDISQCGIEKVSMRSFTG 513

  Fly   584 DRKLWQSRYIPWLQRSYSNIREF---NRANHIIKLRFSSEDYMVAKCSAAQ--PYHLGDLDGDLT 643
            .:||   |:: :|.|:...:.:|   ....|:..:...............|  |.:|.:.|    
Zfish   514 TQKL---RHL-YLSRNKLMVLDFLTQPELTHLTSVYIDKNSITTIPLDVLQKLPMNLSEFD---- 570

  Fly   644 LKFQLLDYEASQYYCFNNTDQL-----------QVDELNCQIRSMS--------DLAEELHHVTN 689
            |....:|...||      ||.:           |::.:.|:..|.:        |:...:|....
Zfish   571 LSSNSIDCSCSQ------TDFILWIIQKQNILKQLENIRCKTFSANTDFKAIDFDIDYCVHKKRL 629

  Fly   690 TVIAVMGSLVGACILGFIIYLKRWHIHYYYSSLKSAALLSSASKESVNKFTNISQRDPSAVYDIF 754
            |::..:..:....:|..::|...:::.|.:       :|.|.       :.:..|::.|  ||.|
Zfish   630 TIVLSVICVTFVVVLAILLYKFWFYVQYCF-------ILFSG-------YRSPGQQECS--YDAF 678

  Fly   755 ISYCQNDRTWVLNELLPNVEE-TGDVSICLHERDFQIGVTILDNIISCMDR----SYSLMLIISS 814
            :.:...|..||:|||:.|:|. ...:.:|||.||||.|.:|..|||   |.    |..:::::|.
Zfish   679 VIFSSYDEAWVMNELMENLENGVPPIQLCLHMRDFQAGKSIASNII---DEGIMGSRKIIVVVSQ 740

  Fly   815 KFLLSHWCQFEMYLAQHRIFEVSKEHLILVFLEDIPRRKRPKT--LQYLMDVKTYIKWPTAKEDR 877
            .|:.|.||:||..|||.|.......::|::.|||:..||..|.  |...:...||:||.......
Zfish   741 HFIDSSWCRFEFELAQSRFLMERNANIIIIILEDVAERKTKKVFGLHKHLKKNTYLKWSRDPLSN 805

  Fly   878 KLFWKRLKRSL 888
            ..||.||::::
Zfish   806 MRFWIRLRKAI 816

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Toll-9NP_001246846.1 leucine-rich repeat 157..185 CDD:275380
LRR_8 262..322 CDD:290566 18/62 (29%)
leucine-rich repeat 264..287 CDD:275380 10/22 (45%)
leucine-rich repeat 288..311 CDD:275380 5/25 (20%)
leucine-rich repeat 312..356 CDD:275380 10/43 (23%)
LRR_8 <344..387 CDD:290566 9/49 (18%)
leucine-rich repeat 357..381 CDD:275380 6/30 (20%)
leucine-rich repeat 382..397 CDD:275380 2/16 (13%)
leucine-rich repeat 405..430 CDD:275380 7/92 (8%)
LRR_8 431..488 CDD:290566 18/88 (20%)
leucine-rich repeat 432..453 CDD:275380 8/50 (16%)
LRR_RI <449..536 CDD:238064 19/95 (20%)
leucine-rich repeat 454..477 CDD:275380 6/24 (25%)
LRR_8 477..536 CDD:290566 12/65 (18%)
leucine-rich repeat 478..501 CDD:275380 5/22 (23%)
leucine-rich repeat 502..525 CDD:275380 4/23 (17%)
TIR 751..891 CDD:214587 52/145 (36%)
tlr4bbNP_997978.2 leucine-rich repeat 56..77 CDD:275380 7/34 (21%)
LRR_8 77..133 CDD:290566 17/55 (31%)
leucine-rich repeat 78..101 CDD:275380 10/22 (45%)
leucine-rich repeat 102..125 CDD:275380 4/22 (18%)
leucine-rich repeat 126..148 CDD:275380 7/26 (27%)
leucine-rich repeat 149..173 CDD:275380 5/25 (20%)
leucine-rich repeat 174..200 CDD:275380 5/25 (20%)
leucine-rich repeat 201..222 CDD:275380 4/20 (20%)
LRR_RI <325..531 CDD:238064 41/213 (19%)
leucine-rich repeat 326..369 CDD:275380 5/42 (12%)
leucine-rich repeat 370..395 CDD:275380 6/24 (25%)
LRR_8 394..455 CDD:290566 12/60 (20%)
leucine-rich repeat 396..419 CDD:275380 5/22 (23%)
leucine-rich repeat 420..444 CDD:275380 4/23 (17%)
LRR_8 443..527 CDD:290566 20/91 (22%)
leucine-rich repeat 445..467 CDD:275380 4/21 (19%)
leucine-rich repeat 468..492 CDD:275380 7/27 (26%)
LRR_8 491..576 CDD:290566 15/92 (16%)
leucine-rich repeat 493..516 CDD:275380 3/22 (14%)
leucine-rich repeat 517..540 CDD:275380 5/26 (19%)
leucine-rich repeat 541..565 CDD:275380 2/23 (9%)
TIR 675..816 CDD:214587 52/143 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm24216
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24365
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.020

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