DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Toll-9 and tlr3

DIOPT Version :9

Sequence 1:NP_001246846.1 Gene:Toll-9 / 40245 FlyBaseID:FBgn0036978 Length:900 Species:Drosophila melanogaster
Sequence 2:NP_001013287.2 Gene:tlr3 / 403126 ZFINID:ZDB-GENE-040219-7 Length:903 Species:Danio rerio


Alignment Length:895 Identity:198/895 - (22%)
Similarity:349/895 - (38%) Gaps:221/895 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 KKYAHKLYLDLSHGNLKDDSDLFREAKLSRKVTIWRTEVFSAAFNTLTAAPFRTLYSMRESLKLL 160
            |...|...||||...||...:.|...|....:.:.|.::.||...|....|         :|..|
Zfish   121 KNCFHLTQLDLSDNKLKLQGEPFSLLKNLTWLDVSRNKLTSAKLGTEPQLP---------NLVTL 176

  Fly   161 SLRGNNFAELIPDAEDFARFVNESRLEA-------SNSVPHHC--------ELLLLHN------T 204
            .|.|||..  |....||:...|.|....       ...|.:.|        :|:|..:      |
Zfish   177 VLSGNNIN--ILQENDFSFLSNSSSFRVLILSSLILKKVENGCFKAIDTLSDLVLDSSKLTSQFT 239

  Fly   205 TDLYD-------RECYLYFNNNTNMGQSITTGRNYTNFIKVLKDRFDQHGSSSQSIAWATFPKMP 262
            |.|::       |...|.......:..:...|...|. |.||    |...:....|....|..:|
Zfish   240 TSLFEELADTALRNLSLKSTEQVTLSNTTFQGLEKTK-ITVL----DLSENRISKIVDGAFQWLP 299

  Fly   263 RLVELDISNCSIEYVSKEAFRNVSNLRR------LFMSDNKIMTISHDTFYYVQGVQYLDLSFTN 321
            :|..|.:.:.:|.:::.::|..:.|||:      |..|...:..|...:|.::..::||.::.|.
Zfish   300 QLEFLSLEHNTIRHLTNDSFSGLGNLRQLNLRKALIKSHASLPVIDDFSFQHLVQLEYLCMANTA 364

  Fly   322 FLTYSYQL-----QLPTLEMALSLIYGLK-IQQNVFKYL---PELIYLDLSHSKMTRNSAVAFAH 377
            |...:.|:     .|.||:::.| |.|:| :....|..|   |.|..|:|:...:.:....||:.
Zfish   365 FRELTEQIFSGLRNLKTLDLSWS-ITGIKTVTNKTFAGLQESPLLQTLNLTGMGINKLEPGAFSS 428

  Fly   378 LGDKLKFLSLCYTAIPMVSSTIFKNTVLEG-----------LDLSGNPYLSYNIIDDAFDGIANT 431
            ||:....|          .|..|.|..|:|           :|:|.|.. |.::.:.:|..: :|
Zfish   429 LGNLSNLL----------MSRNFINQQLQGNEFKGLSNIKEIDMSINQQ-SISLTNASFVHV-ST 481

  Fly   432 LKYLYFERS--NIKDLEWS--KSLKNLQVLGLAGNNINALTPAMFQSLESLEILDLSSNHVGNWY 492
            |:.|...|:  ...|:|.|  :.|.||.:|.|:.|||..:...:.:.|.:|:::.:..|::...:
Zfish   482 LRTLKLGRALKGTLDMEPSPFRPLVNLTILDLSNNNIANINADLLEGLYNLKVVKMQHNNLARLW 546

  Fly   493 R--------------------------------SAFHNNSALRVLNLRSNTINMLSNEMLKDFER 525
            :                                :||...|.|..|:||.|.::.|...:..|...
Zfish   547 KMANPGGPVLFLKDATNLSYLNLDYNGIDEIPPNAFRGFSELHELSLRGNLLDQLHASVFDDLNS 611

  Fly   526 LDYLSLGDNDFICDCHLRAVVEVAAANNKDADCSYRLLNYSQNAVGEEVISLAESLIIDRKLWQS 590
            |.||.|..|  :.....||...|..:..|:       ||...|...    ...||:     ||.|
Zfish   612 LKYLHLQKN--LITSVQRATFGVPLSKLKE-------LNMDHNPFD----CTCESI-----LWFS 658

  Fly   591 RYIPWLQRSYSNIREFNRANHIIKLRFSSEDYMVAKCSAAQPYHLGDLDGDLTLKFQLLDYEASQ 655
            .   ||..:.:::..|            .:.|:   |:....|                      
Zfish   659 E---WLNSTNTSVPGF------------PQSYI---CNTPNAY---------------------- 683

  Fly   656 YYCFNNTDQLQVDELNCQIRSMSDLAEELHHVTNTVIAVMGSLVGACILGFIIYLKRWHIHYYYS 720
               ||:: .:..|.|:|  :.|:.. :.|:.:::|.:.::      ..:.|:::.:.|.|.:|::
Zfish   684 ---FNHS-VMNFDPLSC--KDMTPF-KALYILSSTAVLML------LFISFLVHFQGWRIQFYWN 735

  Fly   721 --------SLKSAALLSSASKESVNKFTNISQRDPSAVYDIFISYCQNDRTWVLNELLPNVEETG 777
                    |||.|       |.:..:|.          :|.:|.:...|::||...|| ::|:. 
Zfish   736 IMVNRMLGSLKDA-------KVTEGRFQ----------FDAYIIHAGEDKSWVERSLL-SLEDK- 781

  Fly   778 DVSICLHERDFQIGVTILDNIISCMDRSYSLMLIISSKFLLSHWC-QFEMYLAQHRIFEVSKEHL 841
            |::....:||...|.:.|:.|:..|..|..::.:|:...|...|| ||:.:.|.|.:.|.:::.|
Zfish   782 DLNFFYEQRDSTPGHSRLETIVDNMVYSRKIIFVITEMLLKDPWCRQFKAHHALHHVMEDNRDSL 846

  Fly   842 ILVFLEDIPRRKRPKTLQY---LMDVKTYIKWPTAKEDRKLFWKRLKRSL 888
            ||:||||:......::|..   ::..|..:.||..||....|.::|:.:|
Zfish   847 ILIFLEDVTDYNLNRSLHLRRGMLKPKCVLYWPLHKERIPAFHQKLRSAL 896

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Toll-9NP_001246846.1 leucine-rich repeat 157..185 CDD:275380 10/27 (37%)
LRR_8 262..322 CDD:290566 15/65 (23%)
leucine-rich repeat 264..287 CDD:275380 4/22 (18%)
leucine-rich repeat 288..311 CDD:275380 6/28 (21%)
leucine-rich repeat 312..356 CDD:275380 14/52 (27%)
LRR_8 <344..387 CDD:290566 12/46 (26%)
leucine-rich repeat 357..381 CDD:275380 7/23 (30%)
leucine-rich repeat 382..397 CDD:275380 1/14 (7%)
leucine-rich repeat 405..430 CDD:275380 7/35 (20%)
LRR_8 431..488 CDD:290566 18/60 (30%)
leucine-rich repeat 432..453 CDD:275380 7/24 (29%)
LRR_RI <449..536 CDD:238064 26/118 (22%)
leucine-rich repeat 454..477 CDD:275380 7/22 (32%)
LRR_8 477..536 CDD:290566 17/90 (19%)
leucine-rich repeat 478..501 CDD:275380 4/54 (7%)
leucine-rich repeat 502..525 CDD:275380 7/22 (32%)
TIR 751..891 CDD:214587 41/142 (29%)
tlr3NP_001013287.2 LRR_RI <49..183 CDD:238064 20/70 (29%)
leucine-rich repeat 57..77 CDD:275380
leucine-rich repeat 78..101 CDD:275380
leucine-rich repeat 102..125 CDD:275380 1/3 (33%)
LRR_8 125..183 CDD:290566 19/66 (29%)
leucine-rich repeat 126..148 CDD:275380 7/21 (33%)
leucine-rich repeat 149..172 CDD:275380 5/31 (16%)
leucine-rich repeat 173..276 CDD:275380 21/104 (20%)
LRR_8 275..331 CDD:290566 15/60 (25%)
leucine-rich repeat 278..300 CDD:275380 5/25 (20%)
leucine-rich repeat 301..324 CDD:275380 4/22 (18%)
leucine-rich repeat 325..354 CDD:275380 6/28 (21%)
leucine-rich repeat 355..378 CDD:275380 5/22 (23%)
leucine-rich repeat 379..404 CDD:275380 9/25 (36%)
LRR_8 406..466 CDD:290566 16/69 (23%)
leucine-rich repeat 408..431 CDD:275380 6/22 (27%)
leucine-rich repeat 432..456 CDD:275380 6/33 (18%)
leucine-rich repeat 457..507 CDD:275380 13/51 (25%)
leucine-rich repeat 482..498 CDD:275380 4/15 (27%)
leucine-rich repeat 508..531 CDD:275380 7/22 (32%)
leucine-rich repeat 532..563 CDD:275380 2/30 (7%)
LRR_8 562..622 CDD:290566 15/61 (25%)
leucine-rich repeat 564..587 CDD:275380 2/22 (9%)
leucine-rich repeat 588..611 CDD:275380 7/22 (32%)
leucine-rich repeat 612..630 CDD:275380 7/19 (37%)
LRRCT 645..>683 CDD:214507 11/64 (17%)
TIR 756..898 CDD:214587 41/153 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24365
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.020

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