DRSC/TRiP Functional Genomics Resources

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Protein Alignment Toll-9 and rdo

DIOPT Version :10

Sequence 1:NP_649214.1 Gene:Toll-9 / 40245 FlyBaseID:FBgn0036978 Length:900 Species:Drosophila melanogaster
Sequence 2:NP_001286024.1 Gene:rdo / 35077 FlyBaseID:FBgn0243486 Length:757 Species:Drosophila melanogaster


Alignment Length:536 Identity:107/536 - (19%)
Similarity:183/536 - (34%) Gaps:178/536 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 LLDLIKDEVIWWQFPNGTLRDSTKKYAHKLYLDLSHGN-LKDDSDLFREAKLSRKVTIWRTEVFS 136
            :|||.|:.:      .....::.:...:.|.||||... |:..|..||.....|::.:       
  Fly   110 ILDLSKNNI------TNITENNFRGQDNLLELDLSKNKVLRMASSTFRHLTDLRRLNL------- 161

  Fly   137 AAFNTLTAAPFRTLYSMRESLKLLSLRGNNFAELIPDAEDFARFVNESRLEASNSVPHHCELLLL 201
             |.|::.....|..: |...||.|.|.||...:|.||              ....||.       
  Fly   162 -ADNSIVELVQRNFF-MLSRLKYLDLSGNPLQDLQPD--------------VFRDVPE------- 203

  Fly   202 HNTTDLYDRECYLYFNNNTNMGQSITTGRNYTNFIKVLKDRFDQHGSSSQSIAWATFPKMPRLVE 266
                                              :||||.|    ....:.|....:..:|.|.|
  Fly   204 ----------------------------------LKVLKCR----NCQLKKINPQMYNLLPLLSE 230

  Fly   267 LDISNCSIEYVSKEAFRNVSNLRRLFMSDNKIMTISHDTFYYVQGVQYLDLSFTNFLTYSYQLQL 331
            ||:.....:::.|:.||:|..|.::.:..|::..:....|...:.:.:||||:...         
  Fly   231 LDLGRNEFKFLDKDEFRDVKRLTKVLLDGNQLSVVVDQLFRMQKSLNHLDLSYNRL--------- 286

  Fly   332 PTLEMALSLIYGLKIQQNVFKYLPELIYLDLSHSKMTRNSAVAFAHLGDKLKFLSLCYTAIPMVS 396
                        .|:..:.|..|..|.:||||::|:.|....:...|.:.|.             
  Fly   287 ------------AKVPNDSFLQLTNLTFLDLSYNKLVRLEPQSIRSLSNLLT------------- 326

  Fly   397 STIFKNTVLEGLDLSGNPYLSYNIIDDAFDGIANTLKYLYFERSNIKDLEWSKSLKNL--QVLGL 459
                       |::|||..:....:.:.|:    .|.|.:|       |..||....|  |:..|
  Fly   327 -----------LNISGNVLMDLREMRETFE----PLIYYFF-------LTCSKLFFQLIPQLTHL 369

  Fly   460 AGNNINALTPAMFQSLESLEILDLSSNHVGNWYRSAFHNNSALRV---------LNLRSNTINML 515
            |..::..:...:....:.|..|::|.|.:         ||:||.|         |:|..|.::.:
  Fly   370 AIADMGTMPVGLLHPFKQLRYLNISGNSL---------NNTALEVIDPCRELEFLDLSRNQLHGI 425

  Fly   516 SNEMLKDFERLDYLSLGDNDFICD-CHLRAVVEV----------------------AAANNKDAD 557
            |.:.:...:.:..:.|.:|..||| ||:..::.|                      |..||.|.:
  Fly   426 SEDTVLRIQGIRNVRLDNNPLICDECHMGKLINVVRQLQWKWDTYPICFLPKSLRGAEINNLDIN 490

  Fly   558 ----CSYRLLNYSQNA 569
                |...:.:..|||
  Fly   491 GLHTCLTFITDEEQNA 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Toll-9NP_649214.1 LRR 198..537 CDD:443914 64/349 (18%)
leucine-rich repeat 264..287 CDD:275380 8/22 (36%)
leucine-rich repeat 288..311 CDD:275380 3/22 (14%)
leucine-rich repeat 312..356 CDD:275380 7/43 (16%)
leucine-rich repeat 357..381 CDD:275380 8/23 (35%)
leucine-rich repeat 382..397 CDD:275380 1/14 (7%)
leucine-rich repeat 405..430 CDD:275380 5/24 (21%)
leucine-rich repeat 432..453 CDD:275380 6/20 (30%)
leucine-rich repeat 454..477 CDD:275380 4/24 (17%)
leucine-rich repeat 478..501 CDD:275380 6/22 (27%)
leucine-rich repeat 502..525 CDD:275380 6/31 (19%)
TIR 751..891 CDD:214587
rdoNP_001286024.1 LRR 69..>446 CDD:443914 93/474 (20%)
leucine-rich repeat 84..107 CDD:275380
leucine-rich repeat 108..131 CDD:275380 4/26 (15%)
leucine-rich repeat 132..155 CDD:275380 9/22 (41%)
leucine-rich repeat 156..179 CDD:275380 5/31 (16%)
leucine-rich repeat 180..203 CDD:275380 10/36 (28%)
leucine-rich repeat 204..251 CDD:275380 15/50 (30%)
leucine-rich repeat 252..275 CDD:275380 3/22 (14%)
leucine-rich repeat 276..299 CDD:275380 7/43 (16%)
leucine-rich repeat 300..323 CDD:275380 8/22 (36%)
leucine-rich repeat 388..411 CDD:275380 9/31 (29%)
Blue background indicates that the domain is not in the aligned region.

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