DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Toll-9 and tlr8

DIOPT Version :9

Sequence 1:NP_001246846.1 Gene:Toll-9 / 40245 FlyBaseID:FBgn0036978 Length:900 Species:Drosophila melanogaster
Sequence 2:XP_002933859.2 Gene:tlr8 / 100496108 XenbaseID:XB-GENE-485083 Length:1037 Species:Xenopus tropicalis


Alignment Length:1037 Identity:218/1037 - (21%)
Similarity:378/1037 - (36%) Gaps:303/1037 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 FLGNVREAYTEFS----IQDGLIIEPDSATTSS-------EEAEEVSKERTDLKSLMLKYESDDG 69
            :|..:.|.:.:.:    |..|:   |.:..|.|       ...:::.....:||.|.|.:....|
 Frog   122 YLTKLEELFIDHNFLCKIPQGI---PSTVQTLSLSYNNIFSVKKQILSPLINLKKLFLNHNCYFG 183

  Fly    70 NSCLLDLIKDEVIWWQFPNGTLRDSTKKYAHKLYLDLSHGNLKDDSDLFREAKLSRKVTIWRTEV 134
            |.|      |.|:                      |:..|.....::|               .|
 Frog   184 NEC------DHVV----------------------DIEEGTFAGLTEL---------------TV 205

  Fly   135 FSAAFNTLTAAPFRTLYSMRESLKLLSLRGNNFAELIPDAEDFARFVNESRLEASNSVP------ 193
            ...:||.:|..|.:    :..|||.|.|..||..  |..::|....:|...|..:.:.|      
 Frog   206 LDLSFNNMTRVPAK----LPASLKELYLSNNNIQ--IIHSDDLQNLINLEVLFLNGNCPRCFNAN 264

  Fly   194 HHCELLL--------------LHNTTDLYDRECYL------YFNNNTNMGQSITTGRNY------ 232
            :.|:.|.              |.|.|:|:.....|      :|.|.|.: :.:....||      
 Frog   265 YPCKNLCKQISITIDPLAFQNLKNLTELHLGSTSLRTIPPIWFQNTTQL-KILNLQLNYLVNEIA 328

  Fly   233 -------TNFIKVLKDRFD-------------QHGSSSQSIA----------------WATFPKM 261
                   ..|::||...|:             .|.|...|:.                .:....:
 Frog   329 SADFLLNLPFLEVLDLSFNYDLRSYANNINISNHFSKLISLQELHIQGYVFKHIAAKNLSPLINL 393

  Fly   262 PRLVELDISNCSIEYVSKEAFRNVSNLRRLFMSDNKIMTISH----------DTFYYVQ--GVQY 314
            |:|..:::....|:.|..|.|:|:|.|:.:::|:|:|...|.          |..|.:.  ||.:
 Frog   394 PKLATINLGINFIKQVDFEVFQNISGLKLIYLSENRITPFSETNKQLFGVCKDQSYRISSPGVTF 458

  Fly   315 ---LDLSFTNFLTYSYQLQL----PTLEMALSLIY-----------------------GLKIQQN 349
               .:...|...::..:.|.    .||:::|:.|:                       |..:...
 Frog   459 PTQSNFQMTKIFSHLVKPQCSSRGKTLDLSLNSIFFIDPEEFRSFSDVSCLNLSFNSIGQDLNGT 523

  Fly   350 VFKYLPELIYLDLSHSKMTRNSAVAFAHLGDKLKFLSLCYTAIPMVSSTIFKNTVLEGLDLSGNP 414
            .|.||..|.|||||.:|:..:|..||..|..                        ||.||||.|.
 Frog   524 EFIYLKNLTYLDLSFNKLDFDSINAFQELPS------------------------LEVLDLSYNS 564

  Fly   415 YLSYNIIDDAFDGIANTLKYLYFERSNIKDLEWSKSLKNLQVLGLAGNNINALTPAMFQSLESLE 479
            :  |.|:    ||:.:.||::             ::|:.|:||.|:.|.|:.||.....| .||:
 Frog   565 H--YFIV----DGVTHRLKFI-------------ENLQYLKVLNLSWNKISTLTDFRLTS-HSLK 609

  Fly   480 ILDLSSNHVG-NW------YRSAFHNNSALRVLNLRSNTINM-----LSN------EMLKDFERL 526
            .|..|.|.:. .|      |:..|.|...|..|::..|.:|.     |||      |:..:..:|
 Frog   610 ELQFSGNRLDVLWKNEDKRYQELFKNLYNLTCLDISYNRLNKMTEVELSNLPLSLTELYLNNNKL 674

  Fly   527 DYLSLGDNDFICDCHLRAVVEVAAANNKDADCSYRLLNYSQNAVGEEVISLAESLIIDRKLWQSR 591
            ||..           .:|:  .|..|.|..|.|:..|......:.....||: ||||......|.
 Frog   675 DYFG-----------WKAL--KAYKNLKHLDLSHNKLTMIMGNLSIHTYSLS-SLIISYNSISSL 725

  Fly   592 YIPWLQRSYSNIREFNRA-NHIIKLRFS-----SEDYMVAKCSAAQPYHLGDLDGDLTLKFQLLD 650
            .:.:|.:| .|:.|.:.: ||:..:..|     ||:|:..         ||..........::.|
 Frog   726 PVAFLHKS-RNLSELDLSFNHLKSINSSVFLSGSENYLTV---------LGLKGNPFVCTCEITD 780

  Fly   651 YEASQYYCFNNTDQLQVDELNCQI----RSMSDLAEELHHVT----------NTVIAVMGSLVGA 701
            : .|..|..|.|......::||..    :....:..::|...          .:|..||    ..
 Frog   781 F-ISWIYANNVTIPRLATDVNCAAPENKKGSGIIFFDVHTCDLDGAAMILYFFSVFLVM----SI 840

  Fly   702 CILGFIIYLKRWHIHYYYSSLKSAALLSSASKESVNKFTNISQRDPSAVYDIFISYCQND---RT 763
            .:|..:|.:..|.:.|.|....:........|.             ..:||:||:|...|   ..
 Frog   841 TVLPILINVFSWDLWYVYHLCVAKLRWHKVCKS-------------KCLYDVFITYDNKDPNVSD 892

  Fly   764 WVLNELLPNVEETGD--VSICLHERDFQIGVTILDNIISCMDRSYSLMLIISSKFLLSHWCQFEM 826
            |:.|||..::|:.||  :.:||.|||::.|..|:||:...:::|...:.:::.|::.|...:...
 Frog   893 WIFNELCQHLEDKGDKHMYLCLEERDWEPGKAIIDNLAHSINQSNKTLFVLTKKYVKSGKFKTAF 957

  Fly   827 YLAQHRIFEVSKEHLILVFLEDIPRRKRPKTLQYLMDVKTYIKWPTAKEDRKLFWKRLKRSL 888
            |||..::.:.:.:.:::|.||.:.:..:...|:..:...:.::||.....:..||:|:|..|
 Frog   958 YLALQKLMDENMDVIVIVLLEPVLQNSQYLRLRRKICKSSIMEWPKNPNTKSFFWQRMKNVL 1019

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Toll-9NP_001246846.1 leucine-rich repeat 157..185 CDD:275380 9/27 (33%)
LRR_8 262..322 CDD:290566 18/74 (24%)
leucine-rich repeat 264..287 CDD:275380 6/22 (27%)
leucine-rich repeat 288..311 CDD:275380 7/34 (21%)
leucine-rich repeat 312..356 CDD:275380 11/73 (15%)
LRR_8 <344..387 CDD:290566 14/42 (33%)
leucine-rich repeat 357..381 CDD:275380 11/23 (48%)
leucine-rich repeat 382..397 CDD:275380 0/14 (0%)
leucine-rich repeat 405..430 CDD:275380 11/24 (46%)
LRR_8 431..488 CDD:290566 17/56 (30%)
leucine-rich repeat 432..453 CDD:275380 3/20 (15%)
LRR_RI <449..536 CDD:238064 30/104 (29%)
leucine-rich repeat 454..477 CDD:275380 9/22 (41%)
LRR_8 477..536 CDD:290566 20/76 (26%)
leucine-rich repeat 478..501 CDD:275380 8/29 (28%)
leucine-rich repeat 502..525 CDD:275380 8/33 (24%)
TIR 751..891 CDD:214587 39/143 (27%)
tlr8XP_002933859.2 leucine-rich repeat 45..64 CDD:275380
leucine-rich repeat 66..87 CDD:275380
leucine-rich repeat 88..125 CDD:275380 1/2 (50%)
leucine-rich repeat 126..145 CDD:275380 3/21 (14%)
PLN00113 132..>563 CDD:215061 97/507 (19%)
leucine-rich repeat 147..170 CDD:275380 2/22 (9%)
leucine-rich repeat 171..202 CDD:275380 11/58 (19%)
leucine-rich repeat 203..223 CDD:275380 6/38 (16%)
leucine-rich repeat 224..247 CDD:275380 8/24 (33%)
leucine-rich repeat 248..288 CDD:275380 5/39 (13%)
leucine-rich repeat 289..312 CDD:275380 5/22 (23%)
leucine-rich repeat 313..338 CDD:275380 2/25 (8%)
leucine-rich repeat 339..368 CDD:275380 5/28 (18%)
leucine-rich repeat 400..419 CDD:275380 5/18 (28%)
leucine-rich repeat 483..505 CDD:275380 4/21 (19%)
leucine-rich repeat 509..530 CDD:275380 4/20 (20%)
leucine-rich repeat 531..554 CDD:275380 11/22 (50%)
leucine-rich repeat 555..584 CDD:275380 14/47 (30%)
leucine-rich repeat 585..607 CDD:275380 9/22 (41%)
PPP1R42 588..772 CDD:411060 53/208 (25%)
leucine-rich repeat 608..638 CDD:275380 8/29 (28%)
leucine-rich repeat 639..663 CDD:275380 7/23 (30%)
leucine-rich repeat 664..687 CDD:275380 6/35 (17%)
leucine-rich repeat 688..711 CDD:275380 4/22 (18%)
leucine-rich repeat 712..735 CDD:275380 8/24 (33%)
leucine-rich repeat 736..754 CDD:275380 4/17 (24%)
TPKR_C2 770..>809 CDD:417692 7/39 (18%)
TIR_2 877..1014 CDD:419986 36/136 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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