DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5618 and Gad2

DIOPT Version :9

Sequence 1:NP_649211.1 Gene:CG5618 / 40241 FlyBaseID:FBgn0036975 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_032104.2 Gene:Gad2 / 14417 MGIID:95634 Length:585 Species:Mus musculus


Alignment Length:499 Identity:213/499 - (42%)
Similarity:316/499 - (63%) Gaps:21/499 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 DGLMDDWKILENVFHLLRKEDTFCVDPQKWDKQ-KIVPFLQPDKLKELINLKVRETENCSLAEIE 79
            ||.......|::|.::|.:   :.|  :.:|:. |::.|..|::|.:..|.::.:... :|.||.
Mouse   102 DGERPTLAFLQDVMNILLQ---YVV--KSFDRSTKVIDFHYPNELLQEYNWELADQPQ-NLEEIL 160

  Fly    80 ELCQQVIHYSVKTSHGRFHNQLFGQLDPFGLAGALVTEAMNGSTYTYEVAPVFSLIETEVIATIC 144
            ..||..:.|::||.|.|:.|||...||..|||...:|...|.:.:|||:||||.|:|...:..:.
Mouse   161 THCQTTLKYAIKTGHPRYFNQLSTGLDMVGLAADWLTSTANTNMFTYEIAPVFVLLEYVTLKKMR 225

  Fly   145 KLAGYK--EGDGIFAPGGSTSNMYGMVLARYKIAPEVKTSGMFGMRPLVLFTSDESHYSFVKAAN 207
            ::.|:.  .|||||:|||:.||||.|::||||:.||||..||..:..|:.|||:.||:|..|.|.
Mouse   226 EIIGWPGGSGDGIFSPGGAISNMYAMLIARYKMFPEVKEKGMAAVPRLIAFTSEHSHFSLKKGAA 290

  Fly   208 WLGLGSYNCVSVRTNERGQMLLDDLEAKIAEAKARGGEPFFVNCTAGTTVLGAFDDINGAADVTE 272
            .||:|:.:.:.::.:|||:|:..|||.:|.|.|.:|..||.|:.||||||.||||.:...||:.:
Mouse   291 ALGIGTDSVILIKCDERGKMIPSDLERRILEVKQKGFVPFLVSATAGTTVYGAFDPLLAVADICK 355

  Fly   273 RHGLWLHVDACLGGAALLSAKNRSLIAGLERANSFSWNPHKTIGAPLQCSLFLTRESGRLLERCN 337
            ::.:|:||||..||..|:|.|::..::|:|||||.:|||||.:|.|||||..|.||.| |::.||
Mouse   356 KYKIWMHVDAAWGGGLLMSRKHKWKLSGVERANSVTWNPHKMMGVPLQCSALLVREEG-LMQSCN 419

  Fly   338 STEAHYLFQQDKFYDVSYDTGNKSVQCGRKIDAFKFWLMLKARGYGKYGLMVDHAIHIARLLEGK 402
            ...|.|||||||.||:|||||:|::||||.:|.||.|||.:|:|...:...:|..:.:|..|...
Mouse   420 QMHASYLFQQDKHYDLSYDTGDKALQCGRHVDVFKLWLMWRAKGTTGFEAHIDKCLELAEYLYTI 484

  Fly   403 LRQRGDRFRLVI---PEHEYSNVCFWFIPKAMRVSSEEETPEWWSRLYTVAPKIKEQMAHSGTLM 464
            ::.| :.:.:|.   |:|  :||||||:|.::|...:.|  |..|||..|||.||.:|...||.|
Mouse   485 IKNR-EGYEMVFDGKPQH--TNVCFWFVPPSLRTLEDNE--ERMSRLSKVAPVIKARMMEYGTTM 544

  Fly   465 IGYSPLKAKNLGNFFRMVFTCFPILKSKELDFILDEIERLGEKI 508
            :.|.||..|  .||||||.: .|....:::||:::||||||:.:
Mouse   545 VSYQPLGDK--VNFFRMVIS-NPAATHQDIDFLIEEIERLGQDL 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5618NP_649211.1 AAT_I 97..504 CDD:302748 188/411 (46%)
Gad2NP_032104.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
Pyridoxal_deC 138..509 CDD:278699 168/375 (45%)
Substrate binding. /evidence=ECO:0000250 181..183 1/1 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62386
OrthoDB 1 1.010 - - D162307at33208
OrthoFinder 1 1.000 - - FOG0000667
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100596
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.730

Return to query results.
Submit another query.