DRSC/TRiP Functional Genomics Resources

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Protein Alignment eRF1 and erfa-1

DIOPT Version :10

Sequence 1:NP_001262105.1 Gene:eRF1 / 40240 FlyBaseID:FBgn0036974 Length:447 Species:Drosophila melanogaster
Sequence 2:NP_001343671.1 Gene:erfa-1 / 179028 WormBaseID:WBGene00020269 Length:593 Species:Caenorhabditis elegans


Alignment Length:413 Identity:330/413 - (79%)
Similarity:372/413 - (90%) Gaps:2/413 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SGEETSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRV 66
            :|.:.:||||||:||||:||||||:||||||||||||||||||::|:.:|||:|:||||||||||
 Worm    10 AGGDDAADRNVEMWKIKRLIKSLELARGNGTSMISLIIPPKDQVARIQRMLAEEYGTASNIKSRV 74

  Fly    67 NRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKF 131
            |||||||||||||.|||||.||||||||:|||||:|:|||||||||||||||.||||||||||||
 Worm    75 NRLSVLGAITSVQGRLKLYNKVPPNGLVVYCGTIMTDEGKEKKVNIDFEPFKAINTSLYLCDNKF 139

  Fly   132 HTEALTALLADDNKFGFIVMDGNGALFGTLQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRME 196
            |||||..|||||||||||:|||||.|||||||||||||||||||||||||||||||:||||||.|
 Worm   140 HTEALQGLLADDNKFGFIIMDGNGCLFGTLQGNTREVLHKFTVDLPKKHGRGGQSAVRFARLRNE 204

  Fly   197 KRHNYVRKVAEVATQLFITNDKPNIAGLILAGSADFKTELSQSDMFDPRLQSKVIKLVDVSYGGE 261
            |||||||||||.:.:.||.|||..:|||||||||||||||.||||||.|||:|:||.||::||||
 Worm   205 KRHNYVRKVAENSVEQFIKNDKVTVAGLILAGSADFKTELGQSDMFDQRLQAKMIKTVDIAYGGE 269

  Fly   262 NGFNQAIELAAESLQNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLRALELGSVETLICWENL 326
            |||||||||||::|.:|||||||||||.||||||||||||.|||:|||.|||:|::|||||||||
 Worm   270 NGFNQAIELAADTLASVKFIQEKKLIGGYFDEISQDTGKYVFGVKDTLAALEMGAIETLICWENL 334

  Fly   327 DIQRYVLKNHANSTSTTVLHLTPEQEKDKSHFTDKESGVEMELIESQPLLEWLANNYKMFGATLE 391
            ||.||.:||...  ...:|:|.|::|||||||||.|:|.:||:||:.|||||.|||||.|||.||
 Worm   335 DIVRYKMKNSLG--EDILLNLRPDEEKDKSHFTDSETGQDMEIIETMPLLEWFANNYKNFGAALE 397

  Fly   392 IITDKSQEGSQFVRGFGGIGGTL 414
            |:|||||||:|||||||||||.|
 Worm   398 IVTDKSQEGAQFVRGFGGIGGLL 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eRF1NP_001262105.1 aRF1/eRF1 13..414 CDD:274719 323/400 (81%)
erfa-1NP_001343671.1 aRF1/eRF1 21..424 CDD:274719 324/402 (81%)

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