DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn77Bc and Spn43Ab

DIOPT Version :9

Sequence 1:NP_001262103.1 Gene:Spn77Bc / 40236 FlyBaseID:FBgn0036970 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster


Alignment Length:420 Identity:90/420 - (21%)
Similarity:151/420 - (35%) Gaps:140/420 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 NLLQME------STHLNLENFAMTPFSTWSLMIMFYEGAEGTTLKQIRDVLAIYVDYPTLRRWYE 101
            |||..:      :.||| ||..::|.:..|.|.:.:.||:|.|..:::..|.:            
  Fly    30 NLLAADLYNAVAADHLN-ENVVISPATIQSSMALAFVGAKGQTASELQQGLRL------------ 81

  Fly   102 DVRAYHYLNSENTKLFSLRYAYYDDVGDLELVKGYNSVVLEGVGEGNVV------LREGRPRGVD 160
                                                     |.|:.:.|      .::...|..:
  Fly    82 -----------------------------------------GPGDADAVSQRSGSYQQALTRDNN 105

  Fly   161 FDQGASIIINDDID-KASHAKIFSSYSRRSFNSTV------------TVLGIT------------ 200
            |....:|.||:::: |.|    |...::|.|:|.:            |..||.            
  Fly   106 FRLANNIYINENLEFKGS----FRDVAQRQFDSNIDKLDFHPPYNKRTADGINRAVATKTNGKIT 166

  Fly   201 -------------------VSYFKAKWKYPFDKSQTKVEQFYNAGGSPAGKVEMM--VQTGKYAY 244
                               ||| .|.|:..|...:|:...| ..|...:.||:.|  :|...||.
  Fly   167 DILRAELLNDRTEGVIVNGVSY-SAAWQKAFRLDKTEKRSF-RTGSGQSVKVDTMWTLQNFNYAE 229

  Fly   245 VNNVKGLQADVLELPFGEHELVMIVILPKPSQRVSLVLKQL--KNLGLHRLLEELEASKNESDVE 307
            ||:   |.|.|:|||:...:..|:::||.....:..:.:.|  ||     ||.|:.| .::..||
  Fly   230 VNS---LDAKVVELPYQNPDFSMLLLLPNRKDGLRSLQQSLSGKN-----LLAEIGA-MSQQKVE 285

  Fly   308 VKLPKFDTRSVLSLEDTVYEAGLTDLRNEFADLG---RMLIPTGDRGAYLSLYHQFARIVVDEEG 369
            |.||||.....|.||....:.|:..:.:...|.|   ||.:     ..:::.....|.:.|.|.|
  Fly   286 VLLPKFSVTFGLGLEGPFKKLGVHTMFSRDGDFGNMYRMFV-----SHFINAVEHKANVEVTEAG 345

  Fly   370 LPNAVPQ---KSSGTNNIKFHINRPFAYLV 396
            :...:..   |...:.:.||..:.||.:.:
  Fly   346 VDQPLETGLLKGLFSRSKKFEADHPFVFAI 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BcNP_001262103.1 SERPIN 36..410 CDD:238101 90/420 (21%)
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 90/420 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446328
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

Return to query results.
Submit another query.