DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn77Bc and Serpinb1c

DIOPT Version :9

Sequence 1:NP_001262103.1 Gene:Spn77Bc / 40236 FlyBaseID:FBgn0036970 Length:416 Species:Drosophila melanogaster
Sequence 2:XP_006516771.1 Gene:Serpinb1c / 380839 MGIID:2445363 Length:408 Species:Mus musculus


Alignment Length:430 Identity:108/430 - (25%)
Similarity:173/430 - (40%) Gaps:81/430 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KLGFLGLFGMVLSLRAHICANTVDTKSLLQKMTDARLQFALNLLQMESTHLNLE-----NFAMTP 61
            :|..||:.|:     |.|..| ||..| :...|..:|..|.||..:|..|...|     |...:|
Mouse     8 QLQVLGVGGL-----ADIVGN-VDPPS-VAAFTMGQLSSANNLFALELFHTLNESNPTGNTIFSP 65

  Fly    62 FSTWSLMIMFYEGAEGTTLKQIRDVL------AIYVDYPTLRRWYEDVRAYHYLNSEN----TKL 116
            .|..|.:.|.|.||.|:|..|:...|      .|:..:.:|........|.|.|...|    .|.
Mouse    66 VSISSALAMVYLGARGSTAAQLSKTLHFDSAEDIHSQFQSLTAEVSKRGASHTLKLANRLYGEKT 130

  Fly   117 FSLRYAYYDDV-----GDLELVKGYNSVVLEGVGEGNVVLREGRPRGVDF---DQGASIIINDDI 173
            ::....|...:     .||.|                          |||   .:.|...||..:
Mouse   131 YNFLPEYLASIQKTYSADLAL--------------------------VDFQHASEDARKEINQWV 169

  Fly   174 DKASHAKIFSSYSRRSFNSTVTVLGITVSYFKAKWKYPFDKSQTKVEQFYNAGGSPAGKVEMMVQ 238
            ...:..||...::....:|...::.:..:|||..|:..|....|.        .:|....:.:.:
Mouse   170 KGQTEEKIQELFAVGVVDSMTKLVLVNATYFKGMWQKKFMARDTT--------DAPFRLSKKVTK 226

  Fly   239 TGKYAYVNN------VKGLQADVLELPFGEHELVMIVILPKPSQRVSLVLKQL-KNLGLHRLLEE 296
            |.|..|:.|      :..|:..|||:|:...||.|:::||:..:..:..|::: |.|.|.: |:|
Mouse   227 TVKMMYLKNNLPFGYIPDLKCKVLEMPYQGGELSMVILLPEDIEDETTGLEEIEKQLTLEK-LQE 290

  Fly   297 LEASKNESDVEVKLPKFDTRSVLSLEDTVYEAGLTDL-RNEFADLGRMLIPTGDRGAYLSLYHQF 360
            .|..:| .||.||||||.......|...:.:.|:.|| .:..|||..|   :|.|..::|.....
Mouse   291 CENLQN-IDVCVKLPKFKMEESYILNSNLGQLGVQDLFSSSKADLSGM---SGSRDLFISKIVHK 351

  Fly   361 ARIVVDEEGLPN--AVPQKSSG--TNNIKFHINRPFAYLV 396
            :.:.|:|||...  |:|....|  ...::|.::.||.:.:
Mouse   352 SYVEVNEEGTETDAAMPGTVVGCCLMPMEFTVDHPFLFFI 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BcNP_001262103.1 SERPIN 36..410 CDD:238101 97/396 (24%)
Serpinb1cXP_006516771.1 serpinB1_LEI 34..408 CDD:381028 97/397 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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