DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn77Bc and Serpinb6b

DIOPT Version :9

Sequence 1:NP_001262103.1 Gene:Spn77Bc / 40236 FlyBaseID:FBgn0036970 Length:416 Species:Drosophila melanogaster
Sequence 2:XP_038951899.1 Gene:Serpinb6b / 364705 RGDID:1310452 Length:388 Species:Rattus norvegicus


Alignment Length:416 Identity:101/416 - (24%)
Similarity:165/416 - (39%) Gaps:66/416 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LQKMTDARLQFALNLLQM---ESTHLNLENFAMTPFSTWSLMIMFYEGAEGTTLKQIRDVLAIYV 91
            :..:.:|...||.|||:.   :|:    :|...:|.|..|.:.|.:.||:|||..|:  :.|:.:
  Rat     1 MDPLLEANGTFAFNLLKTLGEDSS----KNVLFSPLSISSGLAMVFMGAKGTTAHQM--IQALSL 59

  Fly    92 DYPTLRRWYEDVRAYHYLNSENTKLFSLRYAYYDDVGDLELVKGYNSV-------VLEGVGEGNV 149
            | ....|...||.          :.|....|..:..|...|:|..|.:       :|....:...
  Rat    60 D-KCSGRGSRDVH----------QGFQSLLAKVNKTGTQYLLKTANRLFGEKTFDILASFKDACR 113

  Fly   150 VLREGRPRGVDF------------------DQGASIIINDDIDKASHAKIFSSYSRRSFNSTVTV 196
            ...|.....:||                  .:|.||.:|.:    |..||....|..|.|:...:
  Rat   114 KFYEAEMEELDFKGAPEQSRQHINTWVAKKTEGQSISLNWN----SQKKITELLSSGSVNANTPL 174

  Fly   197 LGITVSYFKAKWKYPFDKSQTKVEQFYNAGGSPAGKVEMMVQ--TGKYAYVNNVKGLQADVLELP 259
            :.:...|||..||..|:|..|: |..:....:....|:||.:  |.|..||..:   ...:|.||
  Rat   175 VLVNAIYFKGNWKKQFNKEDTQ-EMPFKVTKNEEKPVKMMFKKSTFKMTYVEEI---STTILLLP 235

  Fly   260 FGEHELVMIVILPKPSQRVSLVLKQLKNLGLHRLLEELEASK-NESDVEVKLPKFDTRSVLSLED 323
            :..:||.||::||.....:.:|.|::.   ..:.:|.....| .|.:|||.||||.......::|
  Rat   236 YVGNELNMIIMLPDEHIELRMVEKEIT---YKKFIEWTSLDKMEEREVEVFLPKFKLEENHDMKD 297

  Fly   324 TVYEAGLTD-LRNEFADLGRMLIPTGDRGAYLSLYHQFARIVVDEEGLPNAVPQKSSGTNNIK-- 385
            .::..|:|| .....||...:   ....|.:||.....:.:.|:|||...|....::.|....  
  Rat   298 VLHRLGMTDAFEQGMADFSGI---ASKEGLFLSKVIHKSFVEVNEEGTEAAAATAANVTFRCMVP 359

  Fly   386 -FHINRPFAYLVLQRTHKLLIHSGVF 410
             |..|.||.:.:.......::..|.|
  Rat   360 YFCANHPFLFFIQHSRTNGIVFCGRF 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BcNP_001262103.1 SERPIN 36..410 CDD:238101 100/408 (25%)
Serpinb6bXP_038951899.1 serpin 1..388 CDD:422956 101/416 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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