DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn77Bc and Spn28Da

DIOPT Version :9

Sequence 1:NP_001262103.1 Gene:Spn77Bc / 40236 FlyBaseID:FBgn0036970 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster


Alignment Length:408 Identity:100/408 - (24%)
Similarity:155/408 - (37%) Gaps:97/408 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 TKSLLQKMTDARLQFALNLLQMESTHLNLENFAMTPFSTWSLMIMFYEGAEGTTLKQIRDVLAIY 90
            |.|:|.:.|.   |...:.||....:    |...:|......|.|...||:|.|..::|..|.:.
  Fly    10 TTSVLGQFTK---QLYRSFLQDNKQY----NIIASPLCVEIGMSMILMGADGNTANELRTALNLP 67

  Fly    91 VDYPTLRRWYE----------DVRAYHYLNSENTKLFSLRYAYYDDVGDLELVKGYNSVVLEGV- 144
            .|...:...|:          .|...|..|    :||     ..:.:|   :.|.||.:|.:.. 
  Fly    68 EDKKNVATIYDKLLTKLERGKKVAILHLAN----RLF-----VNETIG---VNKRYNKLVNKHFR 120

  Fly   145 GEGNVVLREGRPRGV----------DFDQGASIIINDDIDKASHAKIFSSYSRRSFNSTVTVLGI 199
            .|...:....|.:..          ..|....|||..|:.....|.:                 |
  Fly   121 AEAEAIKLADRLKAAWAINDWVLDQTLDNVKDIIIPSDLTPDESAVM-----------------I 168

  Fly   200 TVSYFKAKWKYPFDKSQTKVEQFYNAGGSPAGKVEMMVQTGKYAYVNNVKGLQAD-VLELPFGEH 263
            ..::||..||..|||..||.:.|| ...|....|.||.|.|::    .::....| ::||||...
  Fly   169 NAAFFKGYWKTRFDKMNTKPKVFY-VSKSYQVNVNMMSQVGRF----KMRTSTIDQIIELPFAYS 228

  Fly   264 ELVMIVILPKPSQRVSLVLKQLKNLGLHRLLEELEAS--------KNESDVEVKLPKFDTRSVLS 320
            .|.|:::|||.:..                |.:.||:        ..|.||.|:||||.....:.
  Fly   229 NLSMVIVLPKDNGS----------------LTQAEATIESYPQIVLTEMDVHVQLPKFKIDFRME 277

  Fly   321 LEDTVYEAGLTDLRNEFADLGRMLIPTGDRGAYLSLYHQFARIVVDEE----GLPNAVPQK---S 378
            |.:|:...|:.||.|..:|:..:|..:|.|   :|.....|.|.:|||    |..:|.|.:   .
  Fly   278 LVETLKSMGIQDLFNSSSDISVLLNQSGTR---ISQVVHKAFIEIDEEGGSAGSASASPIRGLSD 339

  Fly   379 SGTNNIKFHINRPFAYLV 396
            ..|:.:.|.:|.||.:::
  Fly   340 YATSVVTFTVNSPFVFMI 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BcNP_001262103.1 SERPIN 36..410 CDD:238101 96/398 (24%)
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 97/402 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446304
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
54.950

Return to query results.
Submit another query.