DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn77Bc and RGD1564786

DIOPT Version :9

Sequence 1:NP_001262103.1 Gene:Spn77Bc / 40236 FlyBaseID:FBgn0036970 Length:416 Species:Drosophila melanogaster
Sequence 2:XP_006253935.2 Gene:RGD1564786 / 306889 RGDID:1564786 Length:420 Species:Rattus norvegicus


Alignment Length:416 Identity:101/416 - (24%)
Similarity:161/416 - (38%) Gaps:72/416 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SLLQKMTDARLQFALNLLQMESTHLNLENFAMTPFSTWSLMIMFYEGAEGTTLKQIRDVLAIYVD 92
            :::..:..|...||:.|.::....::...|...| |..|.:.|...||.|||..||...:     
  Rat    41 TIMDPLLKANGNFAIKLFKVLGEDISKNVFFSLP-SISSALSMILMGANGTTASQICQAM----- 99

  Fly    93 YPTLRRWYE----DVRAYHYL------NSENTKLFSLRYAYYDDVGDLELVKGYNSVVLEGVGEG 147
              :|.:...    ||. .|:|      |..:|:.. ||.|              |||.:|...| 
  Rat   100 --SLDKCNSIGGGDVH-QHFLSLLTKVNKTDTRCM-LRKA--------------NSVFIEDSFE- 145

  Fly   148 NVV---------LREGRPRGVDFDQGA----SIIINDDIDKASHAKIFSSYSRRSFNSTVTVLGI 199
             ::         |.|.....:|| :||    ...||..:.|.:...|.......:.||...:..:
  Rat   146 -ILASFKDACHKLYEAEIEELDF-KGAPEQSRQHINTWVAKKTEDIIRELLPPCTVNSNTCLFLV 208

  Fly   200 TVSYFKAKWKYPFDKSQTKVEQFYNAGGSPAGKVEMMVQ--TGKYAYVNNVKGLQADVLELPFGE 262
            .|.|||...:.||:|:.|: |..:....:....|:||.|  |.|..|   ||.:...||.|||..
  Rat   209 NVIYFKGSLEKPFNKADTR-EMPFKVSMNEKKTVQMMSQKSTFKMTY---VKDISTQVLTLPFEN 269

  Fly   263 HELVMIVILPKPSQRVSLVLKQLKN-LGLHRLLEEL-EASKNESDVEVKLPKFDTRSVLSLEDTV 325
            ..|.|...:|..    .:..::|:| |...:.||.. |.:..|.::||.||:........:...:
  Rat   270 SILSMYFFVPDS----HVAQRKLENELTYDKFLEWTDEDTMEEKEMEVFLPRIKLEESYDMNGVL 330

  Fly   326 YEAGLTD-LRNEFADLGRMLIPTGDRGAYLSLYHQFARIVVDEEGLPNAVP-----QKSSGTNNI 384
            .:.|:|| ...:.||...:   :...|.:||.....:.:.:.|||...|.|     .||..|...
  Rat   331 RKLGMTDAFEEDKADFSGI---SSKHGLFLSKVVHKSFVEMSEEGTEAAAPTDVVTMKSPLTPRC 392

  Fly   385 KFHINRPFAYLVLQRTHKLLIHSGVF 410
            .. .:.||.:.:.....|.::..|.|
  Rat   393 LI-ADHPFLFSIQDTRSKEILFLGRF 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BcNP_001262103.1 SERPIN 36..410 CDD:238101 100/406 (25%)
RGD1564786XP_006253935.2 SERPIN 46..420 CDD:294093 101/411 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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