DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn77Bc and Serpina3b

DIOPT Version :9

Sequence 1:NP_001262103.1 Gene:Spn77Bc / 40236 FlyBaseID:FBgn0036970 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_766612.1 Gene:Serpina3b / 271047 MGIID:2182835 Length:420 Species:Mus musculus


Alignment Length:430 Identity:92/430 - (21%)
Similarity:162/430 - (37%) Gaps:126/430 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LGFLGLFGMVLSLRAHICANTV-----------------DTKSLLQKMTDARL--QFALNL---L 45
            :.|:...|:   |.|.||...:                 ||:..|..:|.|.:  .||.:.   |
Mouse     1 MAFIAALGL---LMAEICPAVICCSDGTLGMHNAVQKGQDTQKQLDSLTLASINTDFAFSFYKEL 62

  Fly    46 QMESTHLNLENFAMTPFSTWSLMIMFYEGAEGTTLKQIRDVL----------------------- 87
            .:::.|   :|.|.:||...:.:.....||:|.||::|.:||                       
Mouse    63 ALKNPH---KNIAFSPFGIATALNSLTLGAKGNTLEEILEVLKFNLTETSEADIHQGFKHLLQRL 124

  Fly    88 -------------AIYVD--YPTLRRWYEDVRA-YHYLNSENTKLFSLRYAYYDDVGDLELVKGY 136
                         |::|:  ...|..:.|..|| ||      |::|:..:....:.  ::|:..|
Mouse   125 SHPGDQVQIRTGNALFVEKHLQILAEFKEKARALYH------TEVFTANFQQPHEA--MKLINSY 181

  Fly   137 NSVVLEGVGEGNVVLREGRPRGVDFDQGASIIINDDIDKASHAKIFSSYSRRSFNSTVTVLGITV 201
            .|...:|..:..|         .|.|...|::|.:|:                            
Mouse   182 MSNQTQGKIKELV---------SDMDGNTSMVIVNDL---------------------------- 209

  Fly   202 SYFKAKWKYPFDKSQTKVEQFYNAGGSPAGKVEMM-VQTGKYAYVNNVKGLQADVLELPFGEHEL 265
             :|||:|..||:...|.:.:|. ...|...||.|| .:..:..|..: :.|:..|:||.:..:..
Mouse   210 -FFKAEWMVPFNSDDTFMGKFI-VDRSRHVKVPMMKTKNLRTPYFRD-EELKCTVVELNYKGNGK 271

  Fly   266 VMIVILPKPSQ-RVSLVLKQLKNLGLHRLLEELEASKNESDVEVKLPKFDTRSVLSLEDTVYEAG 329
            .|.::   |.| ::..|...|:...|.:..:.|...|.:   |:.||||......:|||.:.|.|
Mouse   272 AMFIL---PDQGKMQQVEASLQPGTLKKWRKSLRPRKIK---ELHLPKFSLSQHYNLEDILPELG 330

  Fly   330 LTDLRNEFADLGRMLIPTGDRGAYLSLYHQFARIVVDEEG 369
            :.:|.:..|||..:   ||.:...:|.......:.:.|:|
Mouse   331 IRELFSTQADLSGI---TGVKNITVSEMIHSTELDMTEKG 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BcNP_001262103.1 SERPIN 36..410 CDD:238101 82/380 (22%)
Serpina3bNP_766612.1 SERPIN 51..414 CDD:294093 81/377 (21%)
RCL 367..392 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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