DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn77Bc and Serpina4

DIOPT Version :9

Sequence 1:NP_001262103.1 Gene:Spn77Bc / 40236 FlyBaseID:FBgn0036970 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_659565.2 Gene:Serpina4 / 246328 RGDID:708581 Length:423 Species:Rattus norvegicus


Alignment Length:399 Identity:85/399 - (21%)
Similarity:159/399 - (39%) Gaps:62/399 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 KMTDARLQFALNLLQMESTHLNLENFAMTPFSTWSLMIMFYEGAEGTTLKQIRDVLAIYVDYPTL 96
            ::......||..|..:.::..:.:|...:|.|....:.:...||.|.|..||.:.|...:...:|
  Rat    47 QIASGNANFAFRLYHLIASQNSEKNIFFSPLSISVSLAILSTGAGGDTQAQILEGLGFNLTKLSL 111

  Fly    97 RRWYEDVRAYHY-----------------LNSENTKLFSLRYAYYDDVGDLELVKGYNSVVLEGV 144
            ...:|..|:..:                 :.|:|.::.|      :.|..:|  ..|||.||.  
  Rat   112 PEIHEGFRSLQHTIARPFTEPQISVGSALILSQNLQILS------EFVSAIE--TSYNSKVLH-- 166

  Fly   145 GEGNVVLREGRPRGVDF-DQGASI-IINDDIDKASHAKIFSSYSRRSFNSTVTVLGITVSYFKAK 207
                          .:| |:.|:: :||:.:.:.:..||.:..|  ..:..|.::.:...:|:..
  Rat   167 --------------ANFRDKEAAVQLINNYVKQNTQGKIKNLVS--DLSPDVKMVLVNYIFFQGL 215

  Fly   208 WKYPFDKSQTKVEQFYNAGGSPAGKVEMMVQTGKYAYVNNVKGLQADVLELPFGEHELVMIVILP 272
            ||.||..|:.....|| ...:...|:.||:|..:..:....:.:...||.:.: ..:.|...|||
  Rat   216 WKKPFPSSRVSTSDFY-VDENTVVKIPMMLQDKEDHWYLEDRRVPCTVLRMDY-RGDAVAFFILP 278

  Fly   273 KPSQ--RVSLVLKQLKNLGLHRLLEELEASKNESDVEVKLPKFDTRSVLSLEDTVYEAGLTDLRN 335
            ...:  .|..||.....|...|||:.....:.   :.::||||...:...|::.:.:.|..||..
  Rat   279 DQGKMNEVEQVLSPGMLLRWKRLLQNRFFYRK---LILQLPKFSISNSYELDEILPDLGFQDLFT 340

  Fly   336 EFADLGRMLIPTGDRGAYLS-LYHQFARIVVDEEGLPNAVPQKSSGTNNIKFHINRP-FAYLVLQ 398
            ..|:...:   :.....||| ::|:.. :.|:|.|...|....|..|    |...:| ..||:..
  Rat   341 PNANFSNI---SKKEKLYLSKVFHKTV-LDVNEVGTKAAAATGSFAT----FFSAQPKKRYLIFN 397

  Fly   399 RTHKLLIHS 407
            |...::::|
  Rat   398 RPFLVILYS 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BcNP_001262103.1 SERPIN 36..410 CDD:238101 85/395 (22%)
Serpina4NP_659565.2 SERPIN 52..418 CDD:294093 85/394 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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