DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn77Bc and Serpina3m

DIOPT Version :9

Sequence 1:NP_001262103.1 Gene:Spn77Bc / 40236 FlyBaseID:FBgn0036970 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_033279.2 Gene:Serpina3m / 20717 MGIID:98378 Length:418 Species:Mus musculus


Alignment Length:450 Identity:102/450 - (22%)
Similarity:170/450 - (37%) Gaps:88/450 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LGFLGLFGMVLSLRAHICANTV----DT---KSLLQK------------MTDARLQFALNLLQME 48
            :.|:...|:   |.|.||...:    ||   ..||.|            :......||.:|.:..
Mouse     1 MAFIAALGI---LMAGICPTVLCFSDDTWGIDILLHKNQESGTPDDSLTLASINTDFAFSLYKKM 62

  Fly    49 STHLNLENFAMTPFSTWSLMIMFYEGAEGTTLKQIRDVLA----------IYVDYPTLRRWYEDV 103
            :.....:|...:|.|..:.:.:...||:|.||::|.:.|.          |:..:..|.:.....
Mouse    63 ALKNPDKNIVFSPLSISAALALVSLGAKGNTLEEILEGLKFNLTETSEADIHQGFGHLLQRLSQP 127

  Fly   104 RAYHYLNSENTKLFSLRYAYYDDVGDLELVKGYNSVVLEGVGEGNVVLREGRPRGVDFDQ--GAS 166
            .....:|..|.....         .||:::..::        |....|.:......||.|  .|:
Mouse   128 EDQDQINIGNAMFIE---------KDLQILAEFH--------EKTRALYQTEAFTADFQQPTEAT 175

  Fly   167 IIINDDIDKASHA---KIFSSYSRRSFNSTVTVLGITVSYFKAKWKYPFDKSQTKVEQFYNAGGS 228
            .:|||.:...:..   |:.|....|    |:.|| :...|||.|||..||...|...:|| ....
Mouse   176 KLINDYVSNQTQGMIKKLISELDDR----TLMVL-VNYIYFKGKWKISFDPQDTFESEFY-LDEK 234

  Fly   229 PAGKVEMMVQTGKYAYVNNVKG--LQADVLELPFGEHELVMIVILPKPSQ-RVSLVLKQLKNLGL 290
            .:.||.||..  |:....:.:.  |...||||.:..:...:.::   |.| |:..|...|:...|
Mouse   235 RSVKVPMMKM--KFLTTRHFRDEELSCSVLELKYTGNASALFIL---PDQGRMQQVEASLQPETL 294

  Fly   291 HRLLEELEASKNESDVEVKLPKFDTRSVLSLEDTVYEAGLTDLRNEFADLGRMLIPTGDRGAYLS 355
            .:..:.|:..|..   |:.||||...:..:|:|.:.|.|:.::.::.|||..:   ||.:...:|
Mouse   295 RKWWKSLKTRKIG---ELYLPKFSISTDYNLKDILPELGIKEIFSKQADLSGI---TGTKDLSVS 353

  Fly   356 LYHQFARIVVDEEGLPNAVPQ------KSSGTNNIKFHINRPFAYLVLQRTHKLLIHSGV 409
            .....|.:.|.|.|...|...      :|.....:....||||..::        .|:||
Mouse   354 QVVHKAVLDVAETGTEAAAATGFIFGFRSRRLQTMTVQFNRPFLMVI--------SHTGV 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BcNP_001262103.1 SERPIN 36..410 CDD:238101 90/397 (23%)
Serpina3mNP_033279.2 SERPIN 56..417 CDD:214513 88/391 (23%)
RCL 367..392 3/24 (13%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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