DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn77Bc and Serpinb6b

DIOPT Version :9

Sequence 1:NP_001262103.1 Gene:Spn77Bc / 40236 FlyBaseID:FBgn0036970 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_035584.1 Gene:Serpinb6b / 20708 MGIID:894688 Length:377 Species:Mus musculus


Alignment Length:414 Identity:104/414 - (25%)
Similarity:169/414 - (40%) Gaps:73/414 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LQKMTDARLQFALNLLQM---ESTHLNLENFAMTPFSTWSLMIMFYEGAEGTTLKQIRDVLA--- 88
            :..:.:|...||||||:.   :|:    .|...:|.|..|.:.|.:.||:|||..|:...|:   
Mouse     1 MDPLLEANATFALNLLKTLGEDSS----RNVLFSPISVSSALAMVFMGAKGTTASQMAQALSLDK 61

  Fly    89 --------IYVDYPTLRRWYEDVRAYHYLNSEN----TKLFSLRYAYYDDVGDLELVKGYNSVVL 141
                    ::..:.:|..........:.|.:.|    .|.|.:..::.|...     |.|.:.:.
Mouse    62 CSGKGGRDVHQGFQSLLTETNKTGTQYVLRTANRLFGEKTFDILASFKDSCR-----KFYEAEME 121

  Fly   142 EGVGEGNVVLREGRPRGVDFDQGAS----IIINDDIDKASHAKIFSSYSRRSFNSTVTVLGITVS 202
            |                :|| :||:    ..||..:.|.:..||....|..|.||...::.:...
Mouse   122 E----------------LDF-KGATEQSRQHINAWVAKKTEDKITELLSSGSVNSNTPLVLVNAI 169

  Fly   203 YFKAKWKYPFDKSQTKVEQFYNAGGSPAGKVEMMVQ--TGKYAYVNNVKGLQADVLELPFGEHEL 265
            |||..|:..|:|..|: |..:|........|:||.|  |.|..||..:   ..::|.||:..:||
Mouse   170 YFKGNWEKQFNKEDTQ-EMPFNVTKDVVKPVQMMFQKSTFKMTYVEEI---STNILLLPYVGNEL 230

  Fly   266 VMIVILPKPSQRVSLVLKQLKNLGLHRLLEELEASK-NESDVEVKLPKFDTRSVLSLEDTVYEAG 329
            .||::||.....:|:|.|::.   ..:.:|.....| .|.:|||.||||.......::|.:...|
Mouse   231 NMIIMLPDEHIELSMVEKEIT---YKKFIEWTRLDKMEEEEVEVFLPKFKLEENYDMKDVLCRLG 292

  Fly   330 LTDLRNE-FADLGRMLIPTGDRGAYLSLYHQFARIVVDEEGLPNAVPQKSSGTNNIKFH------ 387
            :||...| .||...:   ....|.:||.....:.:.|:|||...|    ::...||.|.      
Mouse   293 MTDAFEEGMADFSGI---ASKEGLFLSKVIHKSFVEVNEEGTEAA----AATAANIGFRCMVPYF 350

  Fly   388 -INRPFAYLVLQRTHKLLIHSGVF 410
             .|.||.:.:.......::..|.|
Mouse   351 CANHPFLFFIQHSRTSGIVFCGRF 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BcNP_001262103.1 SERPIN 36..410 CDD:238101 103/406 (25%)
Serpinb6bNP_035584.1 serpin 1..377 CDD:393296 104/414 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.020

Return to query results.
Submit another query.