DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn77Bc and Serpina1c

DIOPT Version :9

Sequence 1:NP_001262103.1 Gene:Spn77Bc / 40236 FlyBaseID:FBgn0036970 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_033271.1 Gene:Serpina1c / 20702 MGIID:891969 Length:413 Species:Mus musculus


Alignment Length:445 Identity:93/445 - (20%)
Similarity:173/445 - (38%) Gaps:85/445 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GFLGLFGMVLSLRAHICANTVDTKSLLQKMTDARLQFALNL------LQMESTH-LNLENFAMTP 61
            |.|.|.|:...:.:.:..:..:|.:..:..:.|..:.|.||      |..|..| .|..|...:|
Mouse     8 GLLLLAGLCCLVPSFLAEDVQETDTSQKDQSPASHEIATNLGDFAISLYRELVHQSNTSNIFFSP 72

  Fly    62 FSTWSLMIMFYEGAEGTTLKQIRDVLAIYVDYPTLRRWYEDVRAYHYLNSENTKLFSLRYAYYDD 126
            .|..:...|...|::|.|..||.:.|...:...:....::..:  |.|.:.|.....|:.:..:.
Mouse    73 VSIATAFAMLSLGSKGDTHTQILEGLQFNLTQTSEADIHKSFQ--HLLQTLNRPDSELQLSTGNG 135

  Fly   127 V---GDLELVKGYNSVVLEGVGEGNVVLREGRPR------GVDF--DQGASIIINDDIDKASHAK 180
            :   .||:||:.:              |.|.:..      .|:|  .:.|..:|||.::|.:..|
Mouse   136 LFVNNDLKLVEKF--------------LEEAKNHYQAEVFSVNFAESEEAKKVINDFVEKGTQGK 186

  Fly   181 IFSSYSRRSFNSTVTVLGITVSYFKAKWKYPFDKSQTKVEQFYNAGGSPAGKVEMMVQTGKYAYV 245
            |..:..:.. ..||..|...: .||.|||.|||...|:..:|: ...|...||.||..:|... |
Mouse   187 IAEAVKKLD-QDTVFALANYI-LFKGKWKKPFDPENTEEAEFH-VDESTTVKVPMMTLSGMLD-V 247

  Fly   246 NNVKGLQADVLELPFGEHELVMIVILPKPSQRVSLVLKQLKNLGLHRLLEELEASKNESDVEVKL 310
            ::...|.:.||.:.:..: ...:.:||...:     ::.|:......|:.:....:.....::..
Mouse   248 HHCSTLSSWVLLMDYAGN-ATAVFLLPDDGK-----MQHLEQTLSKELISKFLLKRPRRLAQIHF 306

  Fly   311 PKFDTRSVLSLEDTVYEAGLTDLRNEFADLGRMLIPTGDRGAYLSL---YHQFARIVVDEEG--- 369
            |:.......:|:..:...|:|.:.|..|||..:.    :..|.|.|   .|: |.:.:||.|   
Mouse   307 PRLSISGEYNLKTLMSPLGITRIFNNGADLSGIT----EENAPLKLSQAVHK-AVLTMDETGTEA 366

  Fly   370 --------LPNAVPQKSSGTNNIKFHINRPFAYLVLQR--------------THK 402
                    :|.::|.      .::|  :.||.:::.:.              |||
Mouse   367 AAATVLLAVPYSMPP------IVRF--DHPFLFIIFEEHTQSPLFVGKVVDPTHK 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BcNP_001262103.1 SERPIN 36..410 CDD:238101 88/413 (21%)
Serpina1cNP_033271.1 SERPIN 53..410 CDD:214513 81/395 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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