DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn77Bc and srp-8

DIOPT Version :9

Sequence 1:NP_001262103.1 Gene:Spn77Bc / 40236 FlyBaseID:FBgn0036970 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001309497.1 Gene:srp-8 / 191960 WormBaseID:WBGene00005649 Length:372 Species:Caenorhabditis elegans


Alignment Length:419 Identity:90/419 - (21%)
Similarity:161/419 - (38%) Gaps:100/419 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 MTDARLQFALNLLQMESTHLNLENFAMTPFSTWSLMIMFYEGAEGTTLKQIRDVLAIYVDYPTLR 97
            ::.:..:|||.||..:.   :.::|..:|.:....:...||.|.|.|..||.|.|        .:
 Worm    11 LSKSEAEFALKLLHQQD---HSQSFVFSPIAISLALYSLYEAARGETRSQIHDCL--------FK 64

  Fly    98 RWYEDVRAYHYLN---------------------------SENTKLFSLRYAYYDDVG--DL--- 130
            ...:.....|:.|                           :|:..|..::..|..:|.  ||   
 Worm    65 NATDGEMVTHFSNVSTALSAMKKDPQVKICNHIICRNGIKTESLCLDKVKLLYNCEVSSHDLDNE 129

  Fly   131 -ELVKGYNSVVLEGVGEGNVVLREGRPRGVDFDQGASIIINDDIDKASHAKIFSSYSRRSFNSTV 194
             |.:|..|.::.|.. :|::                         |..:.||       |.:...
 Worm   130 KETIKTINKLIRENT-DGHI-------------------------KKINTKI-------SIDKDQ 161

  Fly   195 TVLGITVSYFKAKWKYPFDKSQTKVEQFYNAGGSPAGKVEMMVQTG-KYAYVNNVKGLQADVLEL 258
            .|:.::.:.|:|:|:..|.|..|..::|:....|.. .::.:..|| ...|..|.|   ..||.|
 Worm   162 VVVFLSAACFEAQWQNKFHKLSTSKKEFFCTANSHR-NIKFLHATGANRKYCENDK---FQVLSL 222

  Fly   259 PFGEHELVMIVILPKPSQRVSLVLKQLKNLGLHRLLEELEASKNESDVEVKLPKFDTRSVLSLED 323
            |:.:....|.:.|||  ::..|. :.||.||. ..::||:::.:...|.|::|.:...:.:.|..
 Worm   223 PYTDSSFEMTIFLPK--EQFGLA-EALKTLGT-STIQELKSNVSNYLVNVQIPIWRNETEIDLNS 283

  Fly   324 TVYEAGLTDLRNEFADLGRMLIPTGDRGAYLSLYHQFARIVVDEEGLPNAVPQK------SSGTN 382
            |:...|:|.:.||.|.:|...     ...::|.:...|.|.|:|.|...|...|      ...|.
 Worm   284 TLQAIGITKILNESAYIGNFA-----ENVHISEFIHKAIIEVNENGTSPATNTKVITKRWREETG 343

  Fly   383 NIK-FHINRPFAYLVLQRTHKLLIHSGVF 410
            .|: |..:.||.|.:..:..  ::..|||
 Worm   344 EIRDFIADHPFLYTIHYKNS--ILFMGVF 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BcNP_001262103.1 SERPIN 36..410 CDD:238101 88/414 (21%)
srp-8NP_001309497.1 serpinL_nematode 14..370 CDD:381047 88/414 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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