DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn77Bc and srp-7

DIOPT Version :9

Sequence 1:NP_001262103.1 Gene:Spn77Bc / 40236 FlyBaseID:FBgn0036970 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001122924.1 Gene:srp-7 / 179195 WormBaseID:WBGene00005648 Length:373 Species:Caenorhabditis elegans


Alignment Length:403 Identity:97/403 - (24%)
Similarity:163/403 - (40%) Gaps:70/403 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LLQKMTDARLQFALNLLQMESTHLNLENFAMTPFSTWSLMIMFYEGAEGTTLKQIRDVLAIYVDY 93
            |||..||    |.|.||:.::..   |:.|.:|.|....:.:.:..|:|.|..|||:.|......
 Worm    11 LLQSETD----FGLGLLRQQNIS---ESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTD 68

  Fly    94 PTLRRWYEDVRAYHYLNSENTKL-----------FSLRYAYYDDVGDLELVKGYNSVVLEGVGEG 147
            ..|.:.:.::.|........|::           |.::.:|.|||..|     ||:    |..  
 Worm    69 EQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKL-----YNA----GAS-- 122

  Fly   148 NVVLREGRPRGVDFD--QGASIIINDDIDKASHAKIFSSYSRRSFNSTVTVLGITVSYFKAKWKY 210
                      .:|||  :..:..||:.:.:.:...|.......|.||.:..:.....||||.|:.
 Worm   123 ----------SLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQN 177

  Fly   211 PFDKSQTKVEQFYNAGGSPAGKVEMMVQTGKYAYVNNVKGLQADVLELPFGEHELVMIVILPKPS 275
            .|.|..|...:|:::..|......:...:....|..|.   |..||.||:.::...:.:.|||..
 Worm   178 KFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAEND---QFQVLSLPYKDNTFALTIFLPKTR 239

  Fly   276 QRVSLVLKQLKNLGLHRLLEELEASKNESDVEVKLPKFDTRSVLSLEDTVYEAGLTDLRNEFADL 340
            ..::..||.|.:..:..||..:    :.:.|.|::||:...:.|.||:.:...|:....:..|||
 Worm   240 FGLTESLKTLDSATIQHLLSNV----SSTSVNVQIPKWKIETKLGLEEALQSLGIKKAFDNDADL 300

  Fly   341 GRMLIPTGDRGAYLSLYHQFARIVVDEEGLPNAVPQKSSGTNNIK-------------FHINRPF 392
            |.|.     .|.|:|.....|.|.|||||...|    ::.|.:|.             |..:.||
 Worm   301 GNMA-----DGLYVSKVTHKALIEVDEEGTKAA----AATTVSISLKSAMFVMEEPKDFTADHPF 356

  Fly   393 AYLVLQRTHKLLI 405
            .:::.:..|.|.:
 Worm   357 FFVLSKDNHPLFV 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BcNP_001262103.1 SERPIN 36..410 CDD:238101 92/396 (23%)
srp-7NP_001122924.1 serpinL_nematode 14..372 CDD:381047 94/400 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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