DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn77Bc and srp-2

DIOPT Version :9

Sequence 1:NP_001262103.1 Gene:Spn77Bc / 40236 FlyBaseID:FBgn0036970 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_503318.1 Gene:srp-2 / 178586 WormBaseID:WBGene00005643 Length:359 Species:Caenorhabditis elegans


Alignment Length:404 Identity:94/404 - (23%)
Similarity:168/404 - (41%) Gaps:80/404 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 MTD---ARLQFALNLLQMESTHLNLENFAMTPFSTWSLMIMFYEGAEGTTLKQIRDVLA---IYV 91
            |:|   ::..|||.||   :|..:..:..::|.|....:.:.:.||.|:|.|::.|||.   |:.
 Worm     1 MSDNATSQTDFALKLL---ATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLGGSRIFE 62

  Fly    92 DYPTLRRWYEDVRAYHYLNSENTKL---------FSLRYAYYDDVGDLELVKGYNSVVLEGVGEG 147
            ::..|.....|..     |...||:         :::...|.:.|..|....|            
 Worm    63 EFSGLMEAVGDTD-----NGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASG------------ 110

  Fly   148 NVVLREGRPRGVDFDQ--GASIIINDDIDKASHAKIFSSYSRRSFNSTVTVLGITVSYFKAKWKY 210
                     ..:||.|  .|:..:|..::..::.||.......|.|:....| :...||||.|:.
 Worm   111 ---------ESLDFSQTEQAAKTMNTFVENHTNGKIKDLIPADSANNAFAFL-VNAMYFKADWQS 165

  Fly   211 PFDKSQTKVEQFYNAGGSPAGKVEMMVQTGKYA-YVNNVKGLQADVLELPFGEHELVMIVILPKP 274
            .|.|..|...:|:.: .:.:.::..:.:..::. |..:|   ...||.|.:.:.:..:.:.||| 
 Worm   166 KFAKESTTGREFFTS-EAESRQIPFLTELDEHRDYTEDV---LFQVLSLKYADPKFTLAIFLPK- 225

  Fly   275 SQRVSLV--LKQLKNLGLHRLLEELEASKNESDVEVKLPKFDTRSVLSLEDTVYEAGLTDLRNEF 337
             ||..||  |:::....:..||.:|::|.    |.|::|||.....|.|::|:...|:.::..|.
 Worm   226 -QRFGLVDALEKINGEYIQNLLNDLKSSY----VSVQIPKFKIEKELDLKETLEAIGIKEIFAEG 285

  Fly   338 ADLG----RMLIPTGDRGAYLSLYHQFARIVVDEEGLPNAVP-------QKSSGTNNIKFHINRP 391
            |||.    ::.|.:|        .|: |.|.|||:|...|..       :........:|..:.|
 Worm   286 ADLSGIADKVFISSG--------IHK-AIIEVDEDGTTAAAASAFKVQLEMMIMAEPTQFVADHP 341

  Fly   392 FAYLVLQRTHKLLI 405
            |.:.||...|.|.:
 Worm   342 FLFAVLFENHTLFL 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BcNP_001262103.1 SERPIN 36..410 CDD:238101 92/398 (23%)
srp-2NP_503318.1 serpinL_nematode 7..358 CDD:381047 92/398 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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