DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn77Bc and Serpina3c

DIOPT Version :9

Sequence 1:NP_001262103.1 Gene:Spn77Bc / 40236 FlyBaseID:FBgn0036970 Length:416 Species:Drosophila melanogaster
Sequence 2:XP_011242304.1 Gene:Serpina3c / 16625 MGIID:102848 Length:436 Species:Mus musculus


Alignment Length:442 Identity:103/442 - (23%)
Similarity:174/442 - (39%) Gaps:73/442 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KLGFLGLFGMVLSLRAHICA-------NTVDTKSLLQK------------MTDARLQFALNLLQM 47
            |:.|:...|:|::   .||.       .|::..:|..|            :......||.:|.:.
Mouse    19 KMAFIVALGLVIT---GICPGVLCFPDGTLERDTLFHKDKENGTQLDSLTLASINTDFAFSLYKK 80

  Fly    48 ESTHLNLENFAMTPFSTWSLMIMFYEGAEGTTLKQIRDVL----------AIYVDYPTLRRWYED 102
            .:......|...:|.|..:.:.:...||:|.||::|.:.|          .|:..:..|.:    
Mouse    81 LALKNPDTNIVFSPLSISAALAIVSLGAKGNTLEEILEGLNFNLTETPEADIHQGFGHLLQ---- 141

  Fly   103 VRAYHYLNSENTKLFSLRYAYYDDVGDLELVKGYNSVVLEGVGEGNVVLREGRPRGVDFDQ--GA 165
             |..|  ..|..::         ..|....|:.:..::.| ..|....|.:......||.|  .|
Mouse   142 -RLSH--PGEQVQI---------STGSALFVEKHLQILAE-FQEKARALYQAEAFTADFQQPLEA 193

  Fly   166 SIIINDDIDKASHAKIFSSYSRRSFNSTVTVLGITVSYFKAKWKYPFDKSQTKVEQFYNAGGSPA 230
            :.:|||.:...:..||....|... ..|:.|| :...|||.|||.||:...|...:|| .....:
Mouse   194 TKLINDYVSNQTQRKIKGLISDLD-TDTLMVL-VNYIYFKGKWKMPFNPRDTFESEFY-LDVKRS 255

  Fly   231 GKVEMM-VQTGKYAYVNNVKGLQADVLELPFGEHELVMIVILPKPSQ-RVSLVLKQLKNLGLHRL 293
            .||.|| ::|....|..: :.|...|:||.:..:...:.::   |.| |:..|...|:...|.:.
Mouse   256 VKVPMMKIKTLTTPYFRD-EELSCTVVELKYKGNASALFIL---PDQGRMQQVEASLQPETLRKW 316

  Fly   294 LEELEASKNESDVEVKLPKFDTRSVLSLEDTVYEAGLTDLRNEFADLGRMLIPTGDRGAYLSLYH 358
            ...|...|..   |:.||||...:..||::.:.|.|:.::.::.|||..:   ||.:...:|...
Mouse   317 KNSLRPRKMG---ELYLPKFSISTDYSLKNILPELGIKEIFSKQADLSGI---TGTKDLIVSQMV 375

  Fly   359 QFARIVVDEEGLPNAVPQKSSGTNNIKFHINRPFAYLVLQRTHKLLI-HSGV 409
            ..|.:.|.|.|.....   ::|.|   |.|......|...||..::| |:.|
Mouse   376 HKAVLDVAETGTEGVA---ATGVN---FRILSRRTSLWFNRTFLMVISHTDV 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BcNP_001262103.1 SERPIN 36..410 CDD:238101 94/389 (24%)
Serpina3cXP_011242304.1 serpinA3_A1AC 56..434 CDD:381019 94/402 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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