DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn77Bc and Serpina3a

DIOPT Version :10

Sequence 1:NP_649207.1 Gene:Spn77Bc / 40236 FlyBaseID:FBgn0036970 Length:416 Species:Drosophila melanogaster
Sequence 2:XP_006240581.2 Gene:Serpina3a / 100909605 RGDID:6502633 Length:410 Species:Rattus norvegicus


Alignment Length:403 Identity:100/403 - (24%)
Similarity:170/403 - (42%) Gaps:47/403 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 VDTKSLLQKMTDARLQFALNLLQMESTHLNLENFAMTPFSTWSLMIMFYEGAEGTTLKQIRDVLA 88
            ||:.:|....||    ||.:|.:........:|...:.||..:.:::...||:..|||:|.:.|.
  Rat    32 VDSSTLSSCNTD----FAFSLYKELVLKNPDKNIVFSSFSISTALVLLSLGAKNNTLKEILEGLK 92

  Fly    89 I-YVDYP--TLRRWYEDVRAYHYLNSENTKLFSLRYAYYDDVGDLELVKGYNSVVLEGVGEGNVV 150
            . ..:.|  .:.:.||.:.....|..:..::         ..|....:|.:..::.| ..|....
  Rat    93 FNLTETPEAEIHQGYEHLLQRLNLPGDQVQI---------STGSALFIKKHLQILAE-FQEKARA 147

  Fly   151 LREGRPRGVDFDQ--GASIIINDDIDKASHAKIFSSYSRRSFNSTVTVLGITVSYFKAKWKYPFD 213
            |.:......||.|  .|..:|||.:.|.:..||....|  ..:...:::.:...|||.|||.|||
  Rat   148 LYQAEAFSTDFQQPHEAKKLINDYVRKQTQGKIKELIS--VLDKKTSMVLVNYIYFKGKWKMPFD 210

  Fly   214 KSQTKVEQFYNAGGSPAGKVEMM-VQTGKYAYVNNVKGLQADVLELPFGEHELVMIVILPKPSQ- 276
            ...|...:|| .....:.||.|| ::.....|..: :.|...||||.:..:...:.::   |.| 
  Rat   211 PHDTFQSEFY-LDEKKSVKVPMMKIEKLTTPYFRD-EELSCSVLELKYTGNASALFIL---PDQG 270

  Fly   277 RVSLVLKQLKNLGLHRLLEELEASKNESDVEVKLPKFDTRSVLSLEDTVYEAGLTDLRNEFADLG 341
            |:..|...|:...|.|..:.|...:.:   |:::|||...:.:.|.|.:.|.|:.::.::.|||.
  Rat   271 RMQQVEASLQPETLRRWKDTLRPRRID---ELRMPKFSISTDMRLGDILPELGIREVFSQQADLS 332

  Fly   342 RMLIPTGDRGAYLSLYHQFARIVVDEEGLPNAVPQKSSGTNNI----KF-----HINRPFAYLVL 397
            |:   ||.:...:|.....|.:.|.|.|...|.   ::|...|    ||     :.||||..::.
  Rat   333 RI---TGAKDLSVSQVVHKAVLDVTETGTEAAA---ATGVKIIPMCAKFYYVTMYFNRPFLMIIS 391

  Fly   398 Q-RTHKLLIHSGV 409
            . .||..|..:.|
  Rat   392 DTNTHIALFMAKV 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BcNP_649207.1 serpin 33..412 CDD:476815 97/394 (25%)
Serpina3aXP_006240581.2 serpinA3_A1AC 27..408 CDD:381019 100/403 (25%)

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