DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn77Bb and Serpind1

DIOPT Version :10

Sequence 1:NP_649206.1 Gene:Spn77Bb / 40235 FlyBaseID:FBgn0036969 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_077358.1 Gene:Serpind1 / 79224 RGDID:619854 Length:479 Species:Rattus norvegicus


Alignment Length:364 Identity:86/364 - (23%)
Similarity:148/364 - (40%) Gaps:40/364 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LGFLGLFGMVLMIMFYEGAEGYTVNELRDVLGIYVDYPTLRRWYEDVRAYHYLNSENTKLFSLRY 67
            :|.....||:.:     |..|.|..|:..||. :.|:......||....::.......:||...:
  Rat   136 VGISTAMGMISL-----GLRGETHEEVHSVLH-FKDFVNASSKYEVTTIHNLFRKLTHRLFRRNF 194

  Fly    68 AY-YDDVGDLELVKGYNSVVLEGVGEGNVVLRE---GRPRGVDFDQGASII-INDDIDKASHAKI 127
            .| ...|.||.:.|.:  .:.|   :....:||   ...:..||...|.|. .|..|.|.:...|
  Rat   195 GYTLQSVNDLYIQKQF--PIRE---DFKAAMREFYFAEAQEADFSDPAFISKANSHILKLTKGLI 254

  Fly   128 FSSYSRRSFNSTVTVLGITVSYFKAKWKYPFDKSQTKVEQF-YNDGGSPAGKVEMMVQTGKYAYV 191
              ..:..:.:|...::.:...|||..|...|....|....| .|:  ....||.||...|.:...
  Rat   255 --KEALENTDSATQMMILNCIYFKGAWMNKFPVEMTHNHNFRLNE--REVVKVSMMQTKGNFLAA 315

  Fly   192 NNVKGLQADVLELPF--GEHELVMIVLLPKSSQGVNLVLYQLKNLGLHRLLEKLEASKNETDVEV 254
            |: :.|..|:|:|.:  |   :.|::::|:...|:..:..||    ..:::|:.:.|......||
  Rat   316 ND-QELDCDILQLEYVGG---ISMLIVIPRKLSGMKTLEAQL----TPQVVERWQKSMTNRTREV 372

  Fly   255 KLPKFDTRSVLSLEDTVYDAGLTDLRNDFADLDKLLIAIGHRGACLTLYHQFARIVVDEEGLPNA 319
            .||||......:|.:.:...|:|.|.|...::.    .|..:...:.|:...:.|.|:||| ..|
  Rat   373 LLPKFKLEKNYNLVEVLKSMGITKLFNKNGNMS----GISDQRIIIDLFKHQSTITVNEEG-TQA 432

  Fly   320 VPQKSSG----KNNIKFHVNRPFAYLVLQKKHKLLIHSG 354
            ....:.|    ...::|.|:|||.:||.:.:...|:..|
  Rat   433 AAVTTVGFMPLSTQVRFTVDRPFLFLVYEHRTSCLLFMG 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BbNP_649206.1 serpin 13..358 CDD:476815 83/354 (23%)
Serpind1NP_077358.1 serpinD1_HCF2 33..479 CDD:381004 86/364 (24%)
2 X 11 AA approximate repeats, Asp/Glu-rich (acidic) (hirudin-like) 55..79
Glycosaminoglycan-binding site. /evidence=ECO:0000250 172..192 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.

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