DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn77Bb and Serpinb1b

DIOPT Version :10

Sequence 1:NP_649206.1 Gene:Spn77Bb / 40235 FlyBaseID:FBgn0036969 Length:362 Species:Drosophila melanogaster
Sequence 2:XP_038952280.1 Gene:Serpinb1b / 306891 RGDID:1560658 Length:380 Species:Rattus norvegicus


Alignment Length:276 Identity:70/276 - (25%)
Similarity:108/276 - (39%) Gaps:71/276 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 VDFDQGASIIINDDIDK----ASHAKIFSSYSRRSFNSTVTVLGITVSYFKAKWKYPF------- 158
            ||| |.||.....:|:|    .:..||....:....|||..::.:...|||..|:..|       
  Rat   121 VDF-QHASEDARKEINKWVKGQTEGKIPELLAGGVVNSTTKLVLVNAIYFKGIWQEKFLTRHTTD 184

  Fly   159 -----DKSQTKVEQFYNDGGSPAGKVEMMVQTGKYAYVNNVKGLQADVLELPFGEHELVMIVLLP 218
                 :|..||:             |:||.|..|:.: ..:..|:..|||:|:...||.|::|||
  Rat   185 APFRLNKKDTKM-------------VKMMYQKEKFPF-GYIPDLKCKVLEMPYQGGELSMVILLP 235

  Fly   219 KSSQGVNLVLYQLKNLGLHRLLEKLEASK----------NETDVEVKLPKFDTRSVLSLEDTVYD 273
            :..:.        ::.||.::.|:|...|          .|.||.|.||||.......|...:..
  Rat   236 EDIED--------ESTGLQKIEEQLTLEKLYEWTKHENLKEIDVHVNLPKFKIEESYILNSNLGR 292

  Fly   274 AGLTDL-RNDFADL-------DKLLIAIGHRGACLTLYHQFARIVVDEEGLPNAVPQKSSGKNNI 330
            .||.|| .:..|||       |..:..|.|:          :.:.|:|||...|.......:..:
  Rat   293 LGLQDLFSSSKADLSGMSESRDIFISKIVHK----------SFVEVNEEGTEAAAATAGLVEYCL 347

  Fly   331 ----KFHVNRPFAYLV 342
                .|.|:.||.:.:
  Rat   348 VSIEAFIVDHPFLFFI 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BbNP_649206.1 serpin 13..358 CDD:476815 70/276 (25%)
Serpinb1bXP_038952280.1 serpinB1_LEI 1..380 CDD:381028 70/276 (25%)

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