DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn77Bb and Serpinc1

DIOPT Version :10

Sequence 1:NP_649206.1 Gene:Spn77Bb / 40235 FlyBaseID:FBgn0036969 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_001012027.1 Gene:Serpinc1 / 304917 RGDID:1307404 Length:465 Species:Rattus norvegicus


Alignment Length:365 Identity:90/365 - (24%)
Similarity:152/365 - (41%) Gaps:63/365 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 GAEGYTVNELRDVLGIYVDYPTLRRWYED----------VRAYHYLNSEN-----TKLF---SLR 66
            ||...|:.:|.:|.    .:.|:.....|          .|.|...|..:     .:||   ||.
  Rat   126 GACNNTLKQLMEVF----KFDTISEKTSDQIHFFFAKLNCRLYRKANKSSNLVSANRLFGDKSLT 186

  Fly    67 Y-AYYDDVGDLELVKGYNSVVLEGVGEGNVVLREGRPRGVDFDQG---ASIIINDDIDKASHAKI 127
            : ..|.||.  |:|.|                  .:.:.:||.:.   :.:.||:.:...:..:|
  Rat   187 FNESYQDVS--EIVYG------------------AKLQPLDFKENPEQSRVTINNWVANKTEGRI 231

  Fly   128 FSSYSRRSFNSTVTVLGITVSYFKAKWKYPFDKSQTKVEQFYN-DGGSPAGKVEMMVQTGKYAYV 191
            .....:.:.:....::.:...|||..||..|....|:.|.|:. ||.|..  |.||.|.||:.|.
  Rat   232 KDVIPQGAIDELTALVLVNTIYFKGLWKSKFSPENTRKEPFHKVDGQSCL--VPMMYQEGKFKYR 294

  Fly   192 NNVKGLQADVLELPFGEHELVMIVLLPKSSQGVNLVLYQLKNLGLHRLLEKLEASKNETDVEVKL 256
            ...:|.|  |||:||...::.|:::|||..:.:..|..:|....|...|::|    :|..:.|.:
  Rat   295 RVGEGTQ--VLEMPFKGDDITMVLILPKPEKSLAKVEQELTPELLQEWLDEL----SEVMLVVHV 353

  Fly   257 PKFDTRSVLSLEDTVYDAGLTDLRNDFADLDKLLIAIGHRGACLT-LYHQFARIVVDEEGLPNA- 319
            |:|......||::.:.|.||.||.:........:||.|.....:: .:|: |.:.|:|||...| 
  Rat   354 PRFRIEDSFSLKEQLQDMGLVDLFSPEKSQLPGIIAEGRDDLFVSDAFHK-AFLEVNEEGSEAAA 417

  Fly   320 -----VPQKSSGKNNIKFHVNRPFAYLVLQKKHKLLIHSG 354
                 :..:|...:.:.|..||||..|:.:.....:|..|
  Rat   418 STSVVITGRSLNPSRVTFKANRPFLVLIREVALNTIIFMG 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BbNP_649206.1 serpin 13..358 CDD:476815 90/365 (25%)
Serpinc1NP_001012027.1 serpinC1_AT3 71..464 CDD:381002 90/365 (25%)

Return to query results.
Submit another query.