DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn77Bb and Serpina3j

DIOPT Version :10

Sequence 1:NP_649206.1 Gene:Spn77Bb / 40235 FlyBaseID:FBgn0036969 Length:362 Species:Drosophila melanogaster
Sequence 2:XP_008763124.2 Gene:Serpina3j / 299277 RGDID:1595900 Length:420 Species:Rattus norvegicus


Alignment Length:372 Identity:87/372 - (23%)
Similarity:127/372 - (34%) Gaps:92/372 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 GAEGYTVNELRDVLGIYVDYPTLRRWYEDVRAYHYLNSENTKLFSLRYAYYDDVGDLELVKGYNS 84
            ||:|.|:.|:.:.|                    ..|...|....:...|.|.:..|....|...
  Rat    88 GAKGNTLQEILEGL--------------------KFNLTETTEIDIHQNYRDLLQRLSQPGGQGQ 132

  Fly    85 V-------------VLEGVGEGNVVLREGRPRGVDFDQ--GASIIINDDIDKASHAKIFSSYSRR 134
            :             :|.|..|....|.:......||.|  .|...|||.:...|..||....:..
  Rat   133 ISRANLLFVEKHLQILNGFKEKAKALYQTEVFATDFQQTCEARKFINDYVMIQSQGKIKEMVTEL 197

  Fly   135 SFNSTVTVLGITVSYFKAKWKYPFDKSQTKVEQFYNDGGSPAGKVEMMVQ---TGKYAYVNNVKG 196
            ...:::.:|...:  |..:|..|||...|.:.:|..|...|. ||.||..   |..|.:...:| 
  Rat   198 EERTSIVMLNFLL--FTGQWSVPFDPDDTFMGKFILDSRRPV-KVLMMKTEDLTTPYFWDEELK- 258

  Fly   197 LQADVLELPFGEHELVMIVLLPKSSQGVNLVLYQLKNLGLHRLLEKLEAS------KNETDV--- 252
              ..|:||.:..|...|.:|   ..||               .:|::|||      :..||.   
  Rat   259 --CTVVELNYKGHGKAMFIL---PDQG---------------KMEQVEASLHPGTLRKWTDSLKP 303

  Fly   253 ----EVKLPKFDTRSVLSLEDTVYDAGLTDLRNDFADLDKLLIAIGHRGA----CLTLYHQ---- 305
                |:.||||.......||:.:.:.|:.|:.|..|||.      |..||    ...:.|.    
  Rat   304 RIIDELHLPKFSLSKTYKLENILPELGIMDVFNTQADLS------GIAGAKDVRVSQMIHNTVLG 362

  Fly   306 FARIVVDEEGLPNAVPQKSSGKNNIKFHVN--RPFAYLVLQKKHKLL 350
            .|....:.|............|.|..| ||  |.|.|:||:...:|:
  Rat   363 MAETGTEAEATTRVEYNFRPAKLNDTF-VNFVRKFLYMVLEPNSELI 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BbNP_649206.1 serpin 13..358 CDD:476815 87/372 (23%)
Serpina3jXP_008763124.2 serpinA3_A1AC 37..417 CDD:381019 87/372 (23%)

Return to query results.
Submit another query.