DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn77Bb and Serpina3k

DIOPT Version :10

Sequence 1:NP_649206.1 Gene:Spn77Bb / 40235 FlyBaseID:FBgn0036969 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_035588.2 Gene:Serpina3k / 20714 MGIID:98377 Length:418 Species:Mus musculus


Alignment Length:432 Identity:98/432 - (22%)
Similarity:157/432 - (36%) Gaps:124/432 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LGFLGLFGMVLM------------------IMFYEGAEGYTVNELRDVLGIYVDYPTLRRWYEDV 49
            :.|:...||:||                  |:|:|..:..|.::...:..:..|:.     :...
Mouse     1 MAFIVAMGMILMAGICPAVLCFPDGTKEMDIVFHEHQDNGTQDDSLTLASVNTDFA-----FSLY 60

  Fly    50 RAYHYLNSENTKLFS-LRYAYYDDVGDLELV----KGYN-SVVLEGV--------------GEGN 94
            :.....|.:...:|| |..:     ..|.||    ||.. ..:|||:              |.||
Mouse    61 KKLALKNQDKNIVFSPLSIS-----AALALVSLGAKGKTMEEILEGLKFNLTETPEADIHQGFGN 120

  Fly    95 VVLREGRPRGVDFDQ---GASIIINDDIDKAS--HAKIFSSYSRRSF------------------ 136
            ::....:|.  |.||   |.::.|..|:...:  |.|..:.|...:|                  
Mouse   121 LLQSLSQPE--DQDQINIGNAMFIEKDLQILAEFHEKTRALYQTEAFTADFQQPTEAKNLINDYV 183

  Fly   137 ----------------NSTVTVLGITVSYFKAKWKYPFDKSQTKVEQFYNDGGSPAGKVEMMVQT 185
                            :.|:.|| :...|||.|||..||...|...:||.| ...:.||.||...
Mouse   184 SNQTQGMIKKLISELDDGTLMVL-VNYIYFKGKWKISFDPQDTFESEFYLD-EKRSVKVPMMKMK 246

  Fly   186 GKYAYVNNVKGLQADVLELPFGEHELVMIVLLPKSSQG-VNLVLYQLKNLGLHRLLEKLEASKNE 249
            ...|.....:.|...||||.:..:...:::|   ..|| :..|...|:...|.:..:.|.:|:.|
Mouse   247 LLTARHFRDEELSCSVLELKYTGNASALLIL---PDQGRMQQVEASLQPETLRKWRKTLFSSQIE 308

  Fly   250 TDVEVKLPKFDTRSVLSL-EDTVYDAGLTDLRNDFADLD------KLLIA-IGHRGACLTLYHQF 306
               |:.||||...|...| ||.:.:.|:.::..:.|||.      ||.:: :.|:          
Mouse   309 ---ELNLPKFSIASDYRLEEDVLPEMGIKEVFTEQADLSGITEAKKLSVSQVVHK---------- 360

  Fly   307 ARIVVDEEGLPNAVPQKSSGKNNIKFHV------NRPFAYLV 342
            |.:.|.|.|...|......|  .|:..|      ||||..::
Mouse   361 AVLDVAETGTEAAAATGVIG--GIRKAVLPAVCFNRPFLIVI 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BbNP_649206.1 serpin 13..358 CDD:476815 95/422 (23%)
Serpina3kNP_035588.2 serpinA3_A1AC 38..418 CDD:381019 90/395 (23%)

Return to query results.
Submit another query.