DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn77Ba and Serpind1

DIOPT Version :10

Sequence 1:NP_649205.3 Gene:Spn77Ba / 40234 FlyBaseID:FBgn0262057 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_077358.1 Gene:Serpind1 / 79224 RGDID:619854 Length:479 Species:Rattus norvegicus


Alignment Length:453 Identity:120/453 - (26%)
Similarity:205/453 - (45%) Gaps:84/453 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 SADPQNNQAPLQLSVGNPLTAFTAPTAFQSGVSHIQSMRSNFDTDVLVSISQGVQDFALDLLQRI 87
            :..|.::::    |.||.|..|       .|.|.||.:      ::|.:      .||.: |.|:
  Rat    80 AVSPTDSES----SAGNILQLF-------QGKSRIQRL------NILNA------KFAFN-LYRV 120

  Fly    88 SVEVEKANKDFMISPFSVWSLLVLLYEGSEGETRNQLKKSLRINVEDEKLRGAYKVWSSFLNITT 152
            ..:...::.:..|:|..:.:.:.::..|..|||..::...|.              :..|:| .:
  Rat   121 LKDQATSSDNIFIAPVGISTAMGMISLGLRGETHEEVHSVLH--------------FKDFVN-AS 170

  Fly   153 STIEVA--------------------TLQAI---YTGKGYPIKNNYRDAIQN-YNVQPMEVDFYS 193
            |..||.                    |||::   |..|.:||:.:::.|::. |..:..|.||..
  Rat   171 SKYEVTTIHNLFRKLTHRLFRRNFGYTLQSVNDLYIQKQFPIREDFKAAMREFYFAEAQEADFSD 235

  Fly   194 PDSVIQINEDTNRTTRGLIPYTILPQDVYGAKMFLLSSLYFKGQWKFPFNKTLTREEPFFSESGE 258
            |..:.:.|....:.|:|||...:...| ...:|.:|:.:||||.|...|...:|....|.....|
  Rat   236 PAFISKANSHILKLTKGLIKEALENTD-SATQMMILNCIYFKGAWMNKFPVEMTHNHNFRLNERE 299

  Fly   259 VIGKIPMMVQEANFAYVSNVEGLDGYVLELPYGTQDRLAMIVVLPKR--GFKLNDVANNLKALGL 321
            |: |:.||..:.|| ..:|.:.||..:|:|.|  ...::|::|:|::  |.|      .|:|...
  Rat   300 VV-KVSMMQTKGNF-LAANDQELDCDILQLEY--VGGISMLIVIPRKLSGMK------TLEAQLT 354

  Fly   322 RPILQR-LAAFRNRASEDNEVEVMMPKFVTATDFTLKGVLIQMGIRDLFDENTANLDRMS-SGLF 384
            ..:::| ..:..||..     ||::|||....::.|..||..|||..||::| .|:..:| ..:.
  Rat   355 PQVVERWQKSMTNRTR-----EVLLPKFKLEKNYNLVEVLKSMGITKLFNKN-GNMSGISDQRII 413

  Fly   385 AKLVVHSTKIIVDEQGTTAGAVTEAALANKATPPKFLLNRPFQYMIVEKATGLLLFAGQVRNP 447
            ..|..|.:.|.|:|:||.|.|||.......:|..:|.::|||.:::.|..|..|||.|:|.||
  Rat   414 IDLFKHQSTITVNEEGTQAAAVTTVGFMPLSTQVRFTVDRPFLFLVYEHRTSCLLFMGRVANP 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BaNP_649205.3 serpin77Ba-like_insects 72..447 CDD:381062 107/402 (27%)
Serpind1NP_077358.1 serpinD1_HCF2 33..479 CDD:381004 120/453 (26%)
2 X 11 AA approximate repeats, Asp/Glu-rich (acidic) (hirudin-like) 55..79
Glycosaminoglycan-binding site. /evidence=ECO:0000250 172..192 2/19 (11%)
Blue background indicates that the domain is not in the aligned region.

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