DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn77Ba and Spn43Aa

DIOPT Version :9

Sequence 1:NP_001287128.1 Gene:Spn77Ba / 40234 FlyBaseID:FBgn0262057 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_524805.1 Gene:Spn43Aa / 45041 FlyBaseID:FBgn0024294 Length:390 Species:Drosophila melanogaster


Alignment Length:404 Identity:113/404 - (27%)
Similarity:194/404 - (48%) Gaps:55/404 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 VLVSISQG----VQD---FALDLLQRISVEVEKANKDFMISPFSVWSLLVLLYEGSEGETRNQLK 125
            |.:|..:|    ::|   ||.:|.|.::  .::.:::.:|||.|:...|.|.|.|:||.|..:|:
  Fly    12 VWISAPEGLGNTIKDRNLFATELFQTLA--TDRQDENVIISPVSIQLALGLAYYGAEGRTAAELQ 74

  Fly   126 KSLRINVEDEK--LRGAY-KVWSSFLNITTSTIEVATLQAIYTGKGYPIKNNYRDAIQNY---NV 184
            |:|..:.::.|  |..:| .:..|::...| .:|:|  ..:||.:...:.:::|:..|.|   .|
  Fly    75 KTLHASAKESKDGLAESYHNLLHSYIKSKT-VLEIA--NKVYTRQNLTVSSHFREVAQKYFDSEV 136

  Fly   185 QPMEVDF-YSPDSVIQINEDTNRTTRGLIPYTI--LPQDVYGAKMFLLSSLYFKGQWKFPFNKTL 246
            :|:  || ...::|.|||....:.|...|...:  |..|   ..:.|::::|||.:|..|||...
  Fly   137 EPL--DFSRETEAVEQINRWVKQQTENKIERVVESLEPD---TNVALVNAIYFKARWARPFNDED 196

  Fly   247 TREEPFF-SESGEVIGKIPMMVQEANFAYVSNVEGLDGYVLELPYGTQDRLAMIVVLPKRGFKLN 310
            ||:..|: |||..:  ::|.|..: |:.|.::...||...:|| :.....|.|..:||.      
  Fly   197 TRDREFWLSESRSI--QVPTMFAD-NWYYYADYPELDAKAIEL-FFENINLTMWFILPN------ 251

  Fly   311 DVANNLKALGLRPILQRLAAFRNRASED----NEVEVMMPKFVTATDFTLKGVLIQMGIRDLFDE 371
                  :..||:.:.|:|........||    ..|.|.:|||....|..|:..|.:|||..:|.:
  Fly   252 ------QRSGLQALEQKLKGVDFNLLEDRWQWQSVSVYLPKFKFEFDTDLRPTLHKMGISAMFSD 310

  Fly   372 --NTANLDRMSS-GLFAKLVVHSTKIIVDEQGTTAGAVTEAALANKATP--PK-FLLNRPFQYMI 430
              :.:|:.:.|. |.....|.|.|.|.|:|.|..|...:.||....:.|  || |:.:.||.::|
  Fly   311 AADFSNIFQDSPIGTRITKVQHKTFIDVNEIGCEAAGASYAAGVPMSLPLDPKTFVADHPFAFII 375

  Fly   431 VEKATGLLLFAGQV 444
            .:|..  :.|.|.:
  Fly   376 RDKHA--VYFTGHI 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BaNP_001287128.1 SERPIN 75..444 CDD:238101 111/395 (28%)
Spn43AaNP_524805.1 SERPIN 28..387 CDD:238101 109/386 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446338
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
54.950

Return to query results.
Submit another query.