DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn77Ba and Spn42De

DIOPT Version :9

Sequence 1:NP_001287128.1 Gene:Spn77Ba / 40234 FlyBaseID:FBgn0262057 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_610246.3 Gene:Spn42De / 35602 FlyBaseID:FBgn0033115 Length:404 Species:Drosophila melanogaster


Alignment Length:401 Identity:106/401 - (26%)
Similarity:169/401 - (42%) Gaps:61/401 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 GVQDFALDLLQRISVEVEKANKDFMISPFSVWSLLVLLYEGSEGETRNQLKKSLRINVEDEKLRG 139
            |...||..|..:::  ..::.::.:.||.|:.:.|.|.|.|:||.|.::||..|       .|.|
  Fly    31 GEAQFASQLFGQLA--KSQSGRNIVFSPSSIRTGLALAYLGAEGSTADELKLGL-------GLEG 86

  Fly   140 AYKV--------------WSSFLNITTSTIEVATLQ---AIYTGKGYPIKNNYRDAI-QNYNVQP 186
            |.|.              |..    .:...:|..|:   .|:..:.:.:...|:|.: :|:....
  Fly    87 AGKTEVAEKLDQLLAKGQWEK----ASGDEDVPKLKYANRIFVTQRFKLTQTYQDLVSKNFAAAA 147

  Fly   187 MEVDF-YSPDSVIQIN----EDTNRTTRGLIPYTILPQDVYGAKMFLLSSLYFKGQWKFPFNKTL 246
            ..|:| ...|:...||    |.|::..:.||....|..|   ....|::::|||..|:..|....
  Fly   148 ENVNFTQKADTAKHINSWVEEQTHQQIKDLIAPESLDAD---TSAILVNAIYFKADWQSSFPDYA 209

  Fly   247 TREEPFFSESGEVIGKIPMMVQEANFAYVSNVEGLDGYVLELPYGTQDRLAMIVVLPKRGFKLND 311
            |....|.:..|..: .:..|.||..|.:....| |...|:||||...| :..:::||:....|..
  Fly   210 TYASDFVNHGGRKV-SVDTMSQEDYFRFGELTE-LKAKVVELPYTGTD-IVFLIILPQEEQGLAI 271

  Fly   312 VANNLKALGLRPILQRLAAFRNRASEDNEVEVMMPKFVTATDFTLKGVLIQMGIRDLFDENTANL 376
            |...|..:.|..|..:|   |.|     :|.|.:|||....|..|:..|.::||:.||... |||
  Fly   272 VEEKLMGIDLNEISSQL---RRR-----KVRVQLPKFKFEFDVPLQAALEELGIKKLFSPG-ANL 327

  Fly   377 DRMSSG---LFAKLVVHSTKIIVDEQGTTAGAVTEAALANKATPP-----KFLLNRPFQYMIVEK 433
            ..:..|   |....|.|...|.|:|:||||...|...::.::...     :|:.:.||.:.|  |
  Fly   328 SSLYQGSEPLRISEVKHKAIIEVNEKGTTASGATFIKVSVESLTIGEEVFEFIADHPFFFAI--K 390

  Fly   434 ATGLLLFAGQV 444
            .....||.|.|
  Fly   391 DAQNTLFLGHV 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BaNP_001287128.1 SERPIN 75..444 CDD:238101 105/399 (26%)
Spn42DeNP_610246.3 SERPIN 31..401 CDD:238101 105/399 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446314
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
54.950

Return to query results.
Submit another query.