DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn77Ba and Serpina3b

DIOPT Version :9

Sequence 1:NP_001287128.1 Gene:Spn77Ba / 40234 FlyBaseID:FBgn0262057 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_766612.1 Gene:Serpina3b / 271047 MGIID:2182835 Length:420 Species:Mus musculus


Alignment Length:410 Identity:100/410 - (24%)
Similarity:188/410 - (45%) Gaps:34/410 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 AFQSGVSHIQSMRSNFDTDVLVSISQGVQDFALDLLQRISVEVEKANKDFMISPFSVWSLLVLLY 113
            |.|.|    |..:...|:..|.||:   .|||....:.::  ::..:|:...|||.:.:.|..|.
Mouse    31 AVQKG----QDTQKQLDSLTLASIN---TDFAFSFYKELA--LKNPHKNIAFSPFGIATALNSLT 86

  Fly   114 EGSEGETRNQLKKSLRINV---EDEKLRGAYKVWSSFLNITTSTIEVATLQAIYTGKGYPIKNNY 175
            .|::|.|..::.:.|:.|:   .:..:...:|.....|:.....:::.|..|::..|...|...:
Mouse    87 LGAKGNTLEEILEVLKFNLTETSEADIHQGFKHLLQRLSHPGDQVQIRTGNALFVEKHLQILAEF 151

  Fly   176 RD-AIQNYNVQPMEVDFYSPDSVIQ-INEDTNRTTRGLIPYTILPQDVYGAKMFLLSSLYFKGQW 238
            :: |...|:.:....:|..|...:: ||...:..|:|.|...:...| ....|.:::.|:||.:|
Mouse   152 KEKARALYHTEVFTANFQQPHEAMKLINSYMSNQTQGKIKELVSDMD-GNTSMVIVNDLFFKAEW 215

  Fly   239 KFPFNKTLTREEPFFSESGEVIGKIPMM-VQEANFAYVSNVEGLDGYVLELPYGTQDRLAMIVVL 302
            ..|||...|....|..:....: |:||| .:.....|..: |.|...|:||.|....: ||. :|
Mouse   216 MVPFNSDDTFMGKFIVDRSRHV-KVPMMKTKNLRTPYFRD-EELKCTVVELNYKGNGK-AMF-IL 276

  Fly   303 PKRGFKLNDVANNLKALGLRPILQRLAAFRNRASEDNEVEVMMPKFVTATDFTLKGVLIQMGIRD 367
            |.:| |:..|..:|:...|:...:.|   |.|..:    |:.:|||..:..:.|:.:|.::|||:
Mouse   277 PDQG-KMQQVEASLQPGTLKKWRKSL---RPRKIK----ELHLPKFSLSQHYNLEDILPELGIRE 333

  Fly   368 LFDENTANLDRMS--SGLFAKLVVHSTKIIVDEQGTTAGAVTEAA---LANKATPPKFLLNRPFQ 427
            || ...|:|..::  ..:....::|||::.:.|:||...|:|...   ::.|..|........|.
Mouse   334 LF-STQADLSGITGVKNITVSEMIHSTELDMTEKGTEGDAITIVGYNFMSAKLKPVFVKFEDQFL 397

  Fly   428 YMIVEKATGLLLFAGQVRNP 447
            |:::::....:...|:|.||
Mouse   398 YIVLDQGDLWIHVMGKVINP 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BaNP_001287128.1 SERPIN 75..444 CDD:238101 89/379 (23%)
Serpina3bNP_766612.1 SERPIN 51..414 CDD:294093 89/381 (23%)
RCL 367..392 6/24 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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