DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn77Ba and Serpina4

DIOPT Version :9

Sequence 1:NP_001287128.1 Gene:Spn77Ba / 40234 FlyBaseID:FBgn0262057 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_659565.2 Gene:Serpina4 / 246328 RGDID:708581 Length:423 Species:Rattus norvegicus


Alignment Length:467 Identity:124/467 - (26%)
Similarity:206/467 - (44%) Gaps:73/467 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CLMLWIPLLLGAIFLCSADPQ-------NNQAPLQLSVGNPLTAFTAPTAFQSGVSHIQSMRSNF 64
            ||:|   ||.|.:.|..:.|.       .||...|.|              |..:|..|      
  Rat     6 CLLL---LLAGLLELSHSQPDQEEPDNTTNQTYRQFS--------------QQNISSYQ------ 47

  Fly    65 DTDVLVSISQGVQDFALDLLQRISVEVEKANKDFMISPFSVWSLLVLLYEGSEGETRNQLKKSLR 129
                   |:.|..:||..|...|:  .:.:.|:...||.|:...|.:|..|:.|:|:.|:.:.|.
  Rat    48 -------IASGNANFAFRLYHLIA--SQNSEKNIFFSPLSISVSLAILSTGAGGDTQAQILEGLG 103

  Fly   130 INVEDEKLRGAYKVWSSFLN-----ITTSTIEVATLQAIYTGKGYPIKNNYRDAIQ-NYNVQPME 188
            .|:....|...::.:.|..:     .|...|.|.:  |:...:...|.:.:..||: :||.:.:.
  Rat   104 FNLTKLSLPEIHEGFRSLQHTIARPFTEPQISVGS--ALILSQNLQILSEFVSAIETSYNSKVLH 166

  Fly   189 VDFYSPDSVIQ-INEDTNRTTRGLIPYTI--LPQDVYGAKMFLLSSLYFKGQWKFPFNKTLTREE 250
            .:|...::.:| ||....:.|:|.|...:  |..||   ||.|::.::|:|.||.||..:.....
  Rat   167 ANFRDKEAAVQLINNYVKQNTQGKIKNLVSDLSPDV---KMVLVNYIFFQGLWKKPFPSSRVSTS 228

  Fly   251 PFFSESGEVIGKIPMMVQEANFAYVSNVEGLDGYVLELPYGTQDRLAMIVVLPKRGFKLNDVANN 315
            .|:.:...|: |||||:|:....:......:...||.:.| ..|.:|.. :||.:| |:|:|...
  Rat   229 DFYVDENTVV-KIPMMLQDKEDHWYLEDRRVPCTVLRMDY-RGDAVAFF-ILPDQG-KMNEVEQV 289

  Fly   316 LK---ALGLRPILQRLAAFRNRASEDNEVEVMMPKFVTATDFTLKGVLIQMGIRDLFDENTANLD 377
            |.   .|..:.:||....:|       ::.:.:|||..:..:.|..:|..:|.:|||..| ||..
  Rat   290 LSPGMLLRWKRLLQNRFFYR-------KLILQLPKFSISNSYELDEILPDLGFQDLFTPN-ANFS 346

  Fly   378 RMS--SGLFAKLVVHSTKIIVDEQGTTAGAVTEAALANKATPPK---FLLNRPFQYMIVEKATGL 437
            .:|  ..|:...|.|.|.:.|:|.||.|.|.|.:.....:..||   .:.||||..::...::..
  Rat   347 NISKKEKLYLSKVFHKTVLDVNEVGTKAAAATGSFATFFSAQPKKRYLIFNRPFLVILYSTSSQD 411

  Fly   438 LLFAGQVRNPKA 449
            :||.|:|.||.|
  Rat   412 ILFMGKVVNPTA 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BaNP_001287128.1 SERPIN 75..444 CDD:238101 104/385 (27%)
Serpina4NP_659565.2 SERPIN 52..418 CDD:294093 103/384 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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