DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn77Ba and srp-8

DIOPT Version :9

Sequence 1:NP_001287128.1 Gene:Spn77Ba / 40234 FlyBaseID:FBgn0262057 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_001309497.1 Gene:srp-8 / 191960 WormBaseID:WBGene00005649 Length:372 Species:Caenorhabditis elegans


Alignment Length:383 Identity:99/383 - (25%)
Similarity:161/383 - (42%) Gaps:33/383 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 ISQGVQDFALDLLQRISVEVEKANKDFMISPFSVWSLLVLLYEGSEGETRNQLKKSLRINVEDEK 136
            :|:...:|||.||.:     :..::.|:.||.::...|..|||.:.||||:|:...|..|..|.:
 Worm    11 LSKSEAEFALKLLHQ-----QDHSQSFVFSPIAISLALYSLYEAARGETRSQIHDCLFKNATDGE 70

  Fly   137 LRGAYKVWSSFLNITTSTIEVATLQAIYTGKGYPIKNNYRDAIQ---NYNVQPMEVDFYSPDSVI 198
            :...:...|:.|:......:|.....|....|...::...|.::   |..|...::| ...:::.
 Worm    71 MVTHFSNVSTALSAMKKDPQVKICNHIICRNGIKTESLCLDKVKLLYNCEVSSHDLD-NEKETIK 134

  Fly   199 QINEDTNRTTRGLIP--YTILPQDVYGAKMFLLSSLYFKGQWKFPFNKTLTREEPFFSESGEVIG 261
            .||:.....|.|.|.  .|.:..|.....:| ||:..|:.||:..|:|..|.::.||..:.....
 Worm   135 TINKLIRENTDGHIKKINTKISIDKDQVVVF-LSAACFEAQWQNKFHKLSTSKKEFFCTANSHRN 198

  Fly   262 KIPMMVQEANFAYVSNVEGLDGY-VLELPYGTQDRLAMIVVLPKRGFKLNDVANNLKALGLRPIL 325
            ...:....||..|..|    |.: ||.||| |.....|.:.|||..|.|   |..||.||...|.
 Worm   199 IKFLHATGANRKYCEN----DKFQVLSLPY-TDSSFEMTIFLPKEQFGL---AEALKTLGTSTIQ 255

  Fly   326 QRLAAFRNRASEDNEVEVMMPKFVTATDFTLKGVLIQMGIRDLFDENTANLDRMSSGLFAKLVVH 390
            :..:...|..     |.|.:|.:...|:..|...|..:||..:.:| :|.:...:..:.....:|
 Worm   256 ELKSNVSNYL-----VNVQIPIWRNETEIDLNSTLQAIGITKILNE-SAYIGNFAENVHISEFIH 314

  Fly   391 STKIIVDEQGTTAG----AVTEAALANKATPPKFLLNRPFQYMIVEKATGLLL--FAG 442
            ...|.|:|.||:..    .:|:...........|:.:.||.|.|..|.:.|.:  |||
 Worm   315 KAIIEVNENGTSPATNTKVITKRWREETGEIRDFIADHPFLYTIHYKNSILFMGVFAG 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BaNP_001287128.1 SERPIN 75..444 CDD:238101 98/380 (26%)
srp-8NP_001309497.1 serpinL_nematode 14..370 CDD:381047 95/376 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.930

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