DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn77Ba and srp-6

DIOPT Version :10

Sequence 1:NP_649205.3 Gene:Spn77Ba / 40234 FlyBaseID:FBgn0262057 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_504890.1 Gene:srp-6 / 179125 WormBaseID:WBGene00005647 Length:375 Species:Caenorhabditis elegans


Alignment Length:367 Identity:96/367 - (26%)
Similarity:164/367 - (44%) Gaps:37/367 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 DFALDLLQRISVEVEKANKDFMISPFSVWSLLVLLYEGSEGETRNQLKKSLRINVEDEKLRGAYK 142
            ||.|.||::     :...:.|:.||.|:...|.|::..::||||::::|:|.....||:|...:.
 Worm    19 DFGLSLLRQ-----QNLTESFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFS 78

  Fly   143 VWSSFLNITTSTIEVATLQAIYTGKGYPIKNNY-RDAIQNYNVQPMEVDFYSPD-SVIQINEDTN 205
            ..|:.|.:.....||.....|::.|.:.||..| .|..:.||....:::|...: |...||...:
 Worm    79 NISAGLLVAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVS 143

  Fly   206 RTTRGLIPYTILPQDVYGAKMFLL-SSLYFKGQWKFPFNKTLTREEPFFSESGEVIGKIPMMVQE 269
            ..|:|.|...|.|..:....:.:| ::.|||..|:..|.|..|.:..|||....        .:|
 Worm   144 ENTKGHIKKIINPDSISEELVAVLTNAFYFKANWQTKFKKESTYKREFFSSENS--------KRE 200

  Fly   270 ANFAYVSN-----VEGLDGYVLELPYGTQDRLAMIVVLPKRGFKLNDVANNLKALGLRPILQRLA 329
            ..|.:..|     .|.....||.||| .....|:.:.|||..|.|::...||.::.::.::..  
 Worm   201 TEFLHSRNSNRKYSENGQFQVLSLPY-KDTSFALSIFLPKTRFGLSEALQNLDSVTIQQLMSN-- 262

  Fly   330 AFRNRASEDNEVEVMMPKFVTATDFTLKGVLIQMGIRDLFDENTANLDRMSSGLFAKLVVHSTKI 394
                  :.:..|.:.|||:...|...|...|:.:||...|.: :|:|...:.|::.....|...|
 Worm   263 ------TSNTLVNIAMPKWKIETALGLNRALMAVGIEKAFTD-SADLSNFADGIYISQAAHKALI 320

  Fly   395 IVDEQGTTAGAVTEAALANKAT------PPKFLLNRPFQYMI 430
            .|||.||.|.|.|..:.:..:.      |.:|..:.||.:::
 Worm   321 EVDEDGTVAAAATTISFSLTSVFIPAEEPIEFTADHPFLFIL 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BaNP_649205.3 serpin77Ba-like_insects 72..447 CDD:381062 96/367 (26%)
srp-6NP_504890.1 serpinL_nematode 16..374 CDD:381047 96/367 (26%)

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