DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn77Ba and srp-6

DIOPT Version :9

Sequence 1:NP_001287128.1 Gene:Spn77Ba / 40234 FlyBaseID:FBgn0262057 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_504890.1 Gene:srp-6 / 179125 WormBaseID:WBGene00005647 Length:375 Species:Caenorhabditis elegans


Alignment Length:367 Identity:96/367 - (26%)
Similarity:164/367 - (44%) Gaps:37/367 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 DFALDLLQRISVEVEKANKDFMISPFSVWSLLVLLYEGSEGETRNQLKKSLRINVEDEKLRGAYK 142
            ||.|.||::     :...:.|:.||.|:...|.|::..::||||::::|:|.....||:|...:.
 Worm    19 DFGLSLLRQ-----QNLTESFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFS 78

  Fly   143 VWSSFLNITTSTIEVATLQAIYTGKGYPIKNNY-RDAIQNYNVQPMEVDFYSPD-SVIQINEDTN 205
            ..|:.|.:.....||.....|::.|.:.||..| .|..:.||....:::|...: |...||...:
 Worm    79 NISAGLLVAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVS 143

  Fly   206 RTTRGLIPYTILPQDVYGAKMFLL-SSLYFKGQWKFPFNKTLTREEPFFSESGEVIGKIPMMVQE 269
            ..|:|.|...|.|..:....:.:| ::.|||..|:..|.|..|.:..|||....        .:|
 Worm   144 ENTKGHIKKIINPDSISEELVAVLTNAFYFKANWQTKFKKESTYKREFFSSENS--------KRE 200

  Fly   270 ANFAYVSN-----VEGLDGYVLELPYGTQDRLAMIVVLPKRGFKLNDVANNLKALGLRPILQRLA 329
            ..|.:..|     .|.....||.||| .....|:.:.|||..|.|::...||.::.::.::..  
 Worm   201 TEFLHSRNSNRKYSENGQFQVLSLPY-KDTSFALSIFLPKTRFGLSEALQNLDSVTIQQLMSN-- 262

  Fly   330 AFRNRASEDNEVEVMMPKFVTATDFTLKGVLIQMGIRDLFDENTANLDRMSSGLFAKLVVHSTKI 394
                  :.:..|.:.|||:...|...|...|:.:||...|.: :|:|...:.|::.....|...|
 Worm   263 ------TSNTLVNIAMPKWKIETALGLNRALMAVGIEKAFTD-SADLSNFADGIYISQAAHKALI 320

  Fly   395 IVDEQGTTAGAVTEAALANKAT------PPKFLLNRPFQYMI 430
            .|||.||.|.|.|..:.:..:.      |.:|..:.||.:::
 Worm   321 EVDEDGTVAAAATTISFSLTSVFIPAEEPIEFTADHPFLFIL 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BaNP_001287128.1 SERPIN 75..444 CDD:238101 96/367 (26%)
srp-6NP_504890.1 serpinL_nematode 16..374 CDD:381047 96/367 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.930

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