DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn77Ba and Serpina3c

DIOPT Version :9

Sequence 1:NP_001287128.1 Gene:Spn77Ba / 40234 FlyBaseID:FBgn0262057 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_011242304.1 Gene:Serpina3c / 16625 MGIID:102848 Length:436 Species:Mus musculus


Alignment Length:401 Identity:100/401 - (24%)
Similarity:185/401 - (46%) Gaps:35/401 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 SNFDTDVLVSISQGVQDFALDLLQRISVEVEKANKDFMISPFSVWSLLVLLYEGSEGETRNQLKK 126
            :..|:..|.||:   .|||..|.::::::....|  .:.||.|:.:.|.::..|::|.|..::.:
Mouse    59 TQLDSLTLASIN---TDFAFSLYKKLALKNPDTN--IVFSPLSISAALAIVSLGAKGNTLEEILE 118

  Fly   127 SLRINVEDEKLRGAYKVWSSFLNITT---STIEVATLQAIYTGKGYPIKNNYRD-AIQNYNVQPM 187
            .|..|:.:......::.:...|...:   ..::::|..|::..|...|...::: |...|..:..
Mouse   119 GLNFNLTETPEADIHQGFGHLLQRLSHPGEQVQISTGSALFVEKHLQILAEFQEKARALYQAEAF 183

  Fly   188 EVDFYSPDSVIQINED-----TNRTTRGLIPYTILPQDVYGAKMFLLSSLYFKGQWKFPFNKTLT 247
            ..||..|....::..|     |.|..:|||  :.|..|..   |.|::.:||||:||.|||...|
Mouse   184 TADFQQPLEATKLINDYVSNQTQRKIKGLI--SDLDTDTL---MVLVNYIYFKGKWKMPFNPRDT 243

  Fly   248 REEPFFSESGEVIGKIPMM-VQEANFAYVSNVEGLDGYVLELPYGTQDRLAMIVVLPKRGFKLND 311
            .|..|:.:....: |:||| ::.....|..: |.|...|:||.|  :...:.:.:||.:| ::..
Mouse   244 FESEFYLDVKRSV-KVPMMKIKTLTTPYFRD-EELSCTVVELKY--KGNASALFILPDQG-RMQQ 303

  Fly   312 VANNLKALGLRPILQRLAAFRNRASEDNEVEVMMPKFVTATDFTLKGVLIQMGIRDLFDENTANL 376
            |..:|:.       :.|..::|........|:.:|||..:||::||.:|.::||:::|.:. |:|
Mouse   304 VEASLQP-------ETLRKWKNSLRPRKMGELYLPKFSISTDYSLKNILPELGIKEIFSKQ-ADL 360

  Fly   377 DRM--SSGLFAKLVVHSTKIIVDEQGTTAGAVTEAALANKATPPKFLLNRPFQYMIVEKATGLLL 439
            ..:  :..|....:||...:.|.|.||...|.|.......:.......||.|..:|........|
Mouse   361 SGITGTKDLIVSQMVHKAVLDVAETGTEGVAATGVNFRILSRRTSLWFNRTFLMVISHTDVQTTL 425

  Fly   440 FAGQVRNPKAA 450
            |..::.:||.|
Mouse   426 FIAKITHPKRA 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn77BaNP_001287128.1 SERPIN 75..444 CDD:238101 93/380 (24%)
Serpina3cXP_011242304.1 serpinA3_A1AC 56..434 CDD:381019 97/397 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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